Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
RAB3DO95716 RNU4-45P-201ENST00000365469 141 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 Y_RNA.395-201ENST00000383945 109 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 SNORA27-201ENST00000384323 126 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 Y_RNA.572-201ENST00000384757 98 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 MIR125B2-201ENST00000385128 89 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 RNU6-1165P-201ENST00000410119 107 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 RNU6-602P-201ENST00000411155 105 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 RNU7-185P-201ENST00000459215 60 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 MTCO2P24-201ENST00000515611 426 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 SNORA25.12-201ENST00000516202 82 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 RNA5SP102-201ENST00000516865 106 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.22□□□□□ -2.37
RAB3DO95716 MIR548S-201ENST00000581352 82 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 Y_RNA.804-201ENST00000615262 101 ntBASIC0.22□□□□□ -2.37
RAB3DO95716 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
RAB3DO95716 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.21□□□□□ -2.38
RAB3DO95716 SNORD44.1-201ENST00000363202 61 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 RNY3P14-201ENST00000384309 102 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 RNU6-364P-201ENST00000384387 107 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 MIR215-201ENST00000384858 110 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 SNORD12C-201ENST00000386307 89 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 Y_RNA.581-201ENST00000391017 97 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 SNORD100-201ENST00000408573 76 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 MIR18B-201ENST00000454574 71 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 RPS29P24-201ENST00000486345 171 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 RNU7-156P-201ENST00000517214 74 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.21□□□□□ -2.38
RAB3DO95716 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.21□□□□□ -2.38
RAB3DO95716 AC090897.1-201ENST00000580909 226 ntBASIC0.21□□□□□ -2.38
RAB3DO95716 snoU2_19.2-201ENST00000363024 80 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 SNORA63C-201ENST00000364578 129 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 SNORA1.1-201ENST00000364671 133 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-290P-201ENST00000365212 101 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 SNORA63.7-201ENST00000365579 123 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 Y_RNA.541-201ENST00000384640 113 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 MIR518A1-201ENST00000385068 85 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-1319P-201ENST00000390855 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-747P-201ENST00000390928 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-241P-201ENST00000391148 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-447P-201ENST00000410293 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-1118P-201ENST00000410382 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-1076P-201ENST00000410397 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-355P-201ENST00000410427 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-791P-201ENST00000410467 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-705P-201ENST00000410601 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-1100P-201ENST00000410691 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-860P-201ENST00000410860 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-1217P-201ENST00000411276 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU6-785P-201ENST00000411324 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 snoU13.2-201ENST00000459201 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU7-53P-201ENST00000516705 60 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNA5SP94-201ENST00000516917 108 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 RNU2-31P-201ENST00000516954 155 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 AC100767.1-201ENST00000528178 123 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 AL008718.3-201ENST00000610217 321 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 U6.90-201ENST00000614007 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 U6.70-201ENST00000620287 104 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 AC090971.5-201ENST00000621102 293 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 snoU18.1-201ENST00000629629 71 ntBASIC0.2□□□□□ -2.38
RAB3DO95716 SNORD42.2-201ENST00000365570 69 ntBASIC0.19□□□□□ -2.38
RAB3DO95716 Y_RNA.380-201ENST00000365663 111 ntBASIC0.19□□□□□ -2.38
RAB3DO95716 MIR1257-201ENST00000408490 117 ntBASIC0.19□□□□□ -2.38
RAB3DO95716 MIR1252-201ENST00000408861 65 ntBASIC0.19□□□□□ -2.38
RAB3DO95716 AF228730.3-201ENST00000436691 102 ntBASIC0.19□□□□□ -2.38
RAB3DO95716 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
RAB3DO95716 RNA5SP458-201ENST00000516188 119 ntBASIC0.19□□□□□ -2.38
RAB3DO95716 MIR4662B-201ENST00000579498 81 ntBASIC0.19□□□□□ -2.38
RAB3DO95716 MIR30D-201ENST00000362283 70 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 Y_RNA.7-201ENST00000362352 102 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 Y_RNA.24-201ENST00000362508 103 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 Y_RNA.26-201ENST00000362539 101 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 RNU6-806P-201ENST00000365147 105 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 Y_RNA.389-201ENST00000383924 113 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 SNORA40.8-201ENST00000411034 126 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 RPL21P38-201ENST00000418090 167 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 ELOCP20-201ENST00000422460 345 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 RNU2-11P-201ENST00000459191 187 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 MIR4524B-201ENST00000581569 115 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 SNORD92-201ENST00000585078 85 ntBASIC0.18□□□□□ -2.38
RAB3DO95716 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.18□□□□□ -2.38
RAB3DO95716 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
RAB3DO95716 MIR342-201ENST00000362212 99 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 SNORA25.1-201ENST00000362326 128 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 Y_RNA.16-201ENST00000362421 102 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 RNU6-888P-201ENST00000363010 101 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 Y_RNA.217-201ENST00000364214 105 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 SNORD24-201ENST00000383884 75 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 MIR563-201ENST00000385080 79 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 RNU6-101P-201ENST00000410323 104 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.17□□□□□ -2.38
RAB3DO95716 Y_RNA.641-201ENST00000459414 105 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 RNU6-365P-201ENST00000517113 106 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 AC022523.2-201ENST00000561045 150 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 MIR3678-201ENST00000578455 94 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 Y_RNA.802-201ENST00000614892 130 ntBASIC0.17□□□□□ -2.38
RAB3DO95716 Y_RNA.66-201ENST00000362862 102 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms