Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 MIR598-201ENST00000384868 97 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 MIR1302-7-201ENST00000408841 72 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 RNU6-847P-201ENST00000411115 108 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.79□□□□□ -2.28
CSDE1O75534 AC067940.1-201ENST00000458411 300 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 MTCO2P24-201ENST00000515611 426 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 SNORD77.4-201ENST00000516158 81 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 RNU6-197P-201ENST00000516680 100 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.79□□□□□ -2.28
CSDE1O75534 RNU6-94P-201ENST00000607728 107 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 AP001282.2-201ENST00000616149 309 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 U6.104-201ENST00000637979 90 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CSDE1O75534 RNU6-654P-201ENST00000364373 107 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 Y_RNA.241-201ENST00000364470 117 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 RNU1-133P-201ENST00000364867 167 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 Y_RNA.461-201ENST00000384263 103 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 SNORA2B-201ENST00000384583 137 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 MIR1302-6-201ENST00000408466 90 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 RNU6-651P-201ENST00000411040 105 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 MIR2115-201ENST00000516657 100 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 AC004812.1-201ENST00000540773 146 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 AC106800.4-201ENST00000614905 153 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 U2.14-201ENST00000615943 113 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 AC243994.1-201ENST00000618627 109 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 MIR6516-201ENST00000630554 81 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 MTND1P7-201ENST00000632801 297 ntBASIC0.78□□□□□ -2.28
CSDE1O75534 RNU6-740P-201ENST00000364734 105 ntBASIC0.77□□□□□ -2.29
CSDE1O75534 RNU6-396P-201ENST00000365369 105 ntBASIC0.77□□□□□ -2.29
CSDE1O75534 RNU6-1160P-201ENST00000384546 104 ntBASIC0.77□□□□□ -2.29
CSDE1O75534 RNA5SP95-201ENST00000410319 137 ntBASIC0.77□□□□□ -2.29
CSDE1O75534 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.77□□□□□ -2.29
CSDE1O75534 AL392103.1-201ENST00000447000 198 ntBASIC0.77□□□□□ -2.29
CSDE1O75534 Y_RNA.679-201ENST00000516416 91 ntBASIC0.77□□□□□ -2.29
CSDE1O75534 MIR548AO-201ENST00000579992 96 ntBASIC0.77□□□□□ -2.29
CSDE1O75534 SNORD115-28-201ENST00000363931 81 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 Y_RNA.229-201ENST00000364347 113 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 Y_RNA.326-201ENST00000365176 113 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 Y_RNA.486-201ENST00000384398 107 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 Y_RNA.540-201ENST00000384638 111 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 MIR606-201ENST00000384851 96 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 SNORD89-201ENST00000390981 114 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 Y_RNA.590-201ENST00000410140 107 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 RNU7-67P-201ENST00000459003 62 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.76□□□□□ -2.29
CSDE1O75534 RNU6-693P-201ENST00000516134 107 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 RNA5SP255-201ENST00000516370 107 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 RNU6-126P-201ENST00000516685 103 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 RNU6-365P-201ENST00000517113 106 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 AC036111.3-201ENST00000526389 112 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 MIR5688-201ENST00000580619 83 ntBASIC0.76□□□□□ -2.29
CSDE1O75534 SNORD113.3-201ENST00000364630 78 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 Y_RNA.483-201ENST00000384380 101 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 Y_RNA.494-201ENST00000384432 111 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 MT-TW-201ENST00000387382 68 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 SNORD111-201ENST00000408139 94 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 RNU6-1270P-201ENST00000517128 108 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 AC100767.1-201ENST00000528178 123 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 AC007751.1-201ENST00000529260 376 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 AL442663.2-201ENST00000554385 511 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 Y_RNA.812-201ENST00000610788 101 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 Y_RNA.784-201ENST00000613803 101 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 Y_RNA.787-201ENST00000616522 101 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 Y_RNA.780-201ENST00000617336 101 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 Y_RNA.801-201ENST00000619005 101 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 7SK.10-201ENST00000621414 298 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 MIR8062-201ENST00000621515 85 ntBASIC0.75□□□□□ -2.29
CSDE1O75534 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CSDE1O75534 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
CSDE1O75534 RNU6-1335P-201ENST00000365426 107 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 Y_RNA.574-201ENST00000384766 95 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 MIR626-201ENST00000385032 94 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 RNU6-613P-201ENST00000410412 108 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 RNU2-70P-201ENST00000410718 179 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 AC087499.4-201ENST00000448505 178 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.74□□□□□ -2.29
CSDE1O75534 AC008737.2-201ENST00000599446 118 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 AP000753.3-201ENST00000604083 169 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 AC134878.1-201ENST00000619901 243 ntBASIC0.74□□□□□ -2.29
CSDE1O75534 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.74□□□□□ -2.29
CSDE1O75534 AC023934.1-201ENST00000574529 2389 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-34-201ENST00000362441 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-12-201ENST00000362583 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-29-201ENST00000362834 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-9-201ENST00000362912 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-21-201ENST00000362963 81 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-14-201ENST00000363090 81 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-13-201ENST00000363358 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-41-201ENST00000363608 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-11-201ENST00000363616 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-5-201ENST00000363633 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-39-201ENST00000363694 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-4-201ENST00000363810 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 Y_RNA.176-201ENST00000363815 109 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-16-201ENST00000363887 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-6-201ENST00000363942 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-42-201ENST00000364273 82 ntBASIC0.73□□□□□ -2.29
CSDE1O75534 SNORD115-15-201ENST00000364809 81 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms