Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AL627230.6-201ENST00000611129 280 ntBASIC2.38□□□□□ -2.03
VAMP4O75379 MIR6845-201ENST00000613182 61 ntBASIC2.38□□□□□ -2.03
VAMP4O75379 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VAMP4O75379 Y_RNA.346-201ENST00000365385 112 ntBASIC2.37□□□□□ -2.03
VAMP4O75379 AL627390.1-201ENST00000396055 340 ntBASIC2.37□□□□□ -2.03
VAMP4O75379 HMGN2P38-201ENST00000423806 265 ntBASIC2.37□□□□□ -2.03
VAMP4O75379 RNU7-12P-201ENST00000516030 62 ntBASIC2.37□□□□□ -2.03
VAMP4O75379 RNU6-781P-201ENST00000516377 101 ntBASIC2.37□□□□□ -2.03
VAMP4O75379 AP003484.1-201ENST00000530974 250 ntBASIC2.37□□□□□ -2.03
VAMP4O75379 AC108081.1-201ENST00000604358 221 ntBASIC2.37□□□□□ -2.03
VAMP4O75379 MIR6715A-201ENST00000615929 79 ntBASIC2.37□□□□□ -2.03
VAMP4O75379 AC015726.2-201ENST00000620112 122 ntBASIC2.37□□□□□ -2.03
VAMP4O75379 SUMO2P12-201ENST00000405924 140 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 RNA5SP100-201ENST00000410903 110 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 RNA5SP59-201ENST00000410922 110 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.36□□□□□ -2.03
VAMP4O75379 HMGN2P19-201ENST00000425149 265 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 snoU13.27-201ENST00000459278 104 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 SNORD36C-201ENST00000516733 66 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 IGKV1-22-201ENST00000524313 326 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.36□□□□□ -2.03
VAMP4O75379 MIR3935-201ENST00000583472 104 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 AL513423.1-201ENST00000621695 132 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.36□□□□□ -2.03
VAMP4O75379 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VAMP4O75379 RNU6-429P-201ENST00000384582 108 ntBASIC2.35□□□□□ -2.03
VAMP4O75379 RNA5SP489-201ENST00000410986 109 ntBASIC2.35□□□□□ -2.03
VAMP4O75379 AL445685.2-201ENST00000422551 342 ntBASIC2.35□□□□□ -2.03
VAMP4O75379 MIR4709-201ENST00000577272 72 ntBASIC2.35□□□□□ -2.03
VAMP4O75379 AL670379.3-201ENST00000605040 251 ntBASIC2.35□□□□□ -2.03
VAMP4O75379 AC021506.2-201ENST00000612354 169 ntBASIC2.35□□□□□ -2.03
VAMP4O75379 AC025166.1-201ENST00000612411 163 ntBASIC2.35□□□□□ -2.03
VAMP4O75379 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.35□□□□□ -2.03
VAMP4O75379 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.35□□□□□ -2.03
VAMP4O75379 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VAMP4O75379 RNA5SP276-201ENST00000362580 94 ntBASIC2.34□□□□□ -2.03
VAMP4O75379 RNU6-44P-201ENST00000384045 107 ntBASIC2.34□□□□□ -2.03
VAMP4O75379 RNU6-360P-201ENST00000390944 104 ntBASIC2.34□□□□□ -2.03
VAMP4O75379 RNA5SP136-201ENST00000410906 107 ntBASIC2.34□□□□□ -2.03
VAMP4O75379 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.34□□□□□ -2.03
VAMP4O75379 RPL23AP6-201ENST00000446637 472 ntBASIC2.34□□□□□ -2.03
VAMP4O75379 RNU7-80P-201ENST00000459562 61 ntBASIC2.34□□□□□ -2.03
VAMP4O75379 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
VAMP4O75379 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
VAMP4O75379 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VAMP4O75379 MIR452-201ENST00000385020 85 ntBASIC2.33□□□□□ -2.04
VAMP4O75379 RNU6-295P-201ENST00000516901 104 ntBASIC2.33□□□□□ -2.04
VAMP4O75379 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.33□□□□□ -2.04
VAMP4O75379 AL137067.1-201ENST00000615933 120 ntBASIC2.33□□□□□ -2.04
VAMP4O75379 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VAMP4O75379 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VAMP4O75379 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.32□□□□□ -2.04
VAMP4O75379 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VAMP4O75379 RNU6-349P-201ENST00000362402 107 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 SNORA16.1-201ENST00000364597 132 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 Y_RNA.351-201ENST00000365436 96 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 Y_RNA.454-201ENST00000384224 113 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 AC099513.1-201ENST00000490423 301 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 SNORA18.7-201ENST00000516910 131 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 RNU7-70P-201ENST00000516941 66 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 Y_RNA.709-201ENST00000516952 92 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 MTND5P34-201ENST00000568888 325 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 MIR4778-201ENST00000577635 80 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 MIR6129-201ENST00000616087 109 ntBASIC2.32□□□□□ -2.04
VAMP4O75379 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.32□□□□□ -2.04
VAMP4O75379 MTND5P18-201ENST00000445624 1801 ntBASIC2.31□□□□□ -2.04
VAMP4O75379 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VAMP4O75379 MIR583-201ENST00000384846 75 ntBASIC2.31□□□□□ -2.04
VAMP4O75379 MIR660-201ENST00000385235 97 ntBASIC2.31□□□□□ -2.04
VAMP4O75379 MIR548A3-201ENST00000385297 97 ntBASIC2.31□□□□□ -2.04
VAMP4O75379 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VAMP4O75379 SNORA26.9-201ENST00000391322 122 ntBASIC2.31□□□□□ -2.04
VAMP4O75379 PGBD4P5-201ENST00000445958 426 ntBASIC2.31□□□□□ -2.04
VAMP4O75379 RNU7-34P-201ENST00000459394 64 ntBASIC2.31□□□□□ -2.04
VAMP4O75379 SNORD33.1-201ENST00000516213 88 ntBASIC2.31□□□□□ -2.04
VAMP4O75379 RNU6-589P-201ENST00000516485 107 ntBASIC2.31□□□□□ -2.04
VAMP4O75379 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.31□□□□□ -2.04
VAMP4O75379 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-34-201ENST00000362441 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-12-201ENST00000362583 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-29-201ENST00000362834 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-9-201ENST00000362912 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-21-201ENST00000362963 81 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-14-201ENST00000363090 81 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-13-201ENST00000363358 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-41-201ENST00000363608 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-11-201ENST00000363616 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-5-201ENST00000363633 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-39-201ENST00000363694 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-4-201ENST00000363810 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-16-201ENST00000363887 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-6-201ENST00000363942 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-42-201ENST00000364273 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-15-201ENST00000364809 81 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 RNU1-133P-201ENST00000364867 167 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-1-201ENST00000364961 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-26-201ENST00000365067 82 ntBASIC2.3□□□□□ -2.04
VAMP4O75379 SNORD115-10-201ENST00000365073 81 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms