| FOXE1 | O00358 | AC131956.1-201 | ENST00000506420 | 258 nt | TSL 2 BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | MTCO2P24-201 | ENST00000515611 | 426 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | RNU6-635P-201 | ENST00000516651 | 102 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | RNU7-149P-201 | ENST00000516739 | 59 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | RNU7-181P-201 | ENST00000517234 | 74 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | SNORA4-201 | ENST00000584302 | 138 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | Y_RNA.812-201 | ENST00000610788 | 101 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | Y_RNA.784-201 | ENST00000613803 | 101 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | Y_RNA.787-201 | ENST00000616522 | 101 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | uc_338.4-201 | ENST00000616635 | 176 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | Y_RNA.780-201 | ENST00000617336 | 101 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | Y_RNA.801-201 | ENST00000619005 | 101 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | 7SK.10-201 | ENST00000621414 | 298 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | MIR8062-201 | ENST00000621515 | 85 nt | BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | SLC8A1-AS1-230 | ENST00000627538 | 212 nt | TSL 5 BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | ZBTB41-201 | ENST00000367405 | 8478 nt | APPRIS P1 TSL 1 (best) BASIC | 0.48 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | HECTD2-202 | ENST00000371667 | 4354 nt | TSL 1 (best) BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | RNA5SP499-201 | ENST00000363982 | 119 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | snoU2_19.4-201 | ENST00000364329 | 80 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | RNU6-1335P-201 | ENST00000365426 | 107 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | Y_RNA.486-201 | ENST00000384398 | 107 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | Y_RNA.547-201 | ENST00000384654 | 119 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | MIR548A2-201 | ENST00000384956 | 97 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | MIR568-201 | ENST00000385036 | 95 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | U8.17-201 | ENST00000391292 | 132 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | RNU6ATAC33P-201 | ENST00000408647 | 126 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | AL358176.2-201 | ENST00000425769 | 204 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | AL157398.1-201 | ENST00000452981 | 186 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | SNORD2.1-201 | ENST00000458762 | 69 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | RNU2-13P-201 | ENST00000515909 | 113 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | SCARNA8-201 | ENST00000515924 | 131 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | SNORD77.4-201 | ENST00000516158 | 81 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | Y_RNA.666-201 | ENST00000516187 | 112 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | RN7SKP12-201 | ENST00000516275 | 143 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | RNU7-25P-201 | ENST00000516544 | 62 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | AL117187.1-201 | ENST00000555482 | 181 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | MIR2681-201 | ENST00000581814 | 105 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | AC087685.1-201 | ENST00000587507 | 141 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | AC008737.2-201 | ENST00000599446 | 118 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | AC011921.3-201 | ENST00000605540 | 361 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | TTC28-AS1_2.1-201 | ENST00000611117 | 157 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | Pinc.1-201 | ENST00000616452 | 154 nt | BASIC | 0.47 | □□□□□ -2.33 | | |
| FOXE1 | O00358 | MIR335-201 | ENST00000362173 | 94 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.24-201 | ENST00000362508 | 103 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.44-201 | ENST00000362676 | 108 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.145-201 | ENST00000363527 | 102 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | RNU6-654P-201 | ENST00000364373 | 107 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | RNU1-133P-201 | ENST00000364867 | 167 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.293-201 | ENST00000364908 | 93 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | RNU6-1138P-201 | ENST00000365359 | 106 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.422-201 | ENST00000384054 | 114 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.574-201 | ENST00000384766 | 95 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MIR626-201 | ENST00000385032 | 94 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MIR526A2-201 | ENST00000390198 | 65 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | RNU6-994P-201 | ENST00000410507 | 111 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | RNU6-938P-201 | ENST00000411285 | 103 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | snoU13.18-201 | ENST00000459483 | 104 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | AC095059.1-201 | ENST00000502570 | 349 nt | TSL 5 BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | SCARNA15.1-201 | ENST00000516384 | 125 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | AC100767.1-201 | ENST00000528178 | 123 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | AL122017.1-202 | ENST00000570612 | 319 nt | TSL 5 BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MIR4724-201 | ENST00000579485 | 89 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MIR4282-201 | ENST00000583613 | 67 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | AC012433.1-201 | ENST00000588916 | 398 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | AC006504.6-201 | ENST00000590142 | 199 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | AL360085.1-201 | ENST00000604713 | 532 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | KCNQ1OT1_5.1-201 | ENST00000621902 | 226 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | AC008133.2-201 | ENST00000624540 | 351 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | AC023934.1-201 | ENST00000574529 | 2389 nt | BASIC | 0.46 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | EVI2B-201 | ENST00000330927 | 1999 nt | APPRIS P1 TSL 1 (best) BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.47-201 | ENST00000362697 | 108 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.76-201 | ENST00000362931 | 109 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.82-201 | ENST00000363000 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.92-201 | ENST00000363043 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.133-201 | ENST00000363428 | 110 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.229-201 | ENST00000364347 | 113 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.235-201 | ENST00000364412 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.306-201 | ENST00000365015 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.312-201 | ENST00000365089 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.322-201 | ENST00000365151 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.461-201 | ENST00000384263 | 103 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | SNORD38C-201 | ENST00000384381 | 69 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.508-201 | ENST00000384502 | 114 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MT-TT-201 | ENST00000387460 | 66 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | RNA5SP496-201 | ENST00000391240 | 109 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MIR1827-201 | ENST00000408549 | 66 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MIR548O-201 | ENST00000408583 | 114 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MTND4LP30-201 | ENST00000454092 | 297 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.650-201 | ENST00000459002 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MTND1P19-201 | ENST00000511780 | 315 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | RNU6-453P-201 | ENST00000516819 | 85 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.777-201 | ENST00000516982 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MIR548AO-201 | ENST00000579992 | 96 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.771-201 | ENST00000598668 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | U2.14-201 | ENST00000615943 | 113 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | AC015726.2-201 | ENST00000620112 | 122 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | MIR6513-201 | ENST00000621188 | 64 nt | BASIC | 0.45 | □□□□□ -2.34 | | |
| FOXE1 | O00358 | Y_RNA.789-201 | ENST00000622480 | 102 nt | BASIC | 0.45 | □□□□□ -2.34 | | |