Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR548P-201ENST00000408336 84 ntBASIC0.55□□□□□ -2.32
SLC28A1O00337 AC090844.1-201ENST00000422019 156 ntBASIC0.55□□□□□ -2.32
SLC28A1O00337 Y_RNA.641-201ENST00000459414 105 ntBASIC0.55□□□□□ -2.32
SLC28A1O00337 RNU6-1143P-201ENST00000516125 104 ntBASIC0.55□□□□□ -2.32
SLC28A1O00337 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
SLC28A1O00337 SNORA27.4-201ENST00000516650 95 ntBASIC0.55□□□□□ -2.32
SLC28A1O00337 Y_RNA.802-201ENST00000614892 130 ntBASIC0.55□□□□□ -2.32
SLC28A1O00337 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SLC28A1O00337 SNORA36.2-201ENST00000384004 127 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 Y_RNA.486-201ENST00000384398 107 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 Y_RNA.572-201ENST00000384757 98 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 SNORD83.1-201ENST00000411362 77 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 MTCO2P24-201ENST00000515611 426 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 RNU6-977P-201ENST00000516411 103 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 RNU6-958P-201ENST00000516995 106 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.54□□□□□ -2.32
SLC28A1O00337 MIR5688-201ENST00000580619 83 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 MIR4680-201ENST00000580906 66 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 MIR3171-201ENST00000584270 74 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 AC006006.1-201ENST00000603082 144 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 AP000942.4-201ENST00000604811 241 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 MIR8070-201ENST00000616510 88 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 RMST_2.1-201ENST00000617263 136 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
SLC28A1O00337 Y_RNA.4-201ENST00000362333 112 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 MIR520F-201ENST00000384824 87 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 MIR548A2-201ENST00000384956 97 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 SNORA40.5-201ENST00000391061 128 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 Y_RNA.587-201ENST00000391210 103 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 MTCO2P12-201ENST00000427426 682 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 RNU7-62P-201ENST00000458856 62 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 AP003733.2-201ENST00000529409 171 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.53□□□□□ -2.32
SLC28A1O00337 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 MIR4771-2-201ENST00000577758 74 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 MIR4771-1-201ENST00000582617 74 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 MIR4452-201ENST00000583004 71 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 Z83818.1-201ENST00000603584 150 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 uc_338.6-201ENST00000613544 171 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 snoU18.1-201ENST00000629629 71 ntBASIC0.53□□□□□ -2.32
SLC28A1O00337 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
SLC28A1O00337 Y_RNA.164-201ENST00000363709 102 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 SNORA63C-201ENST00000364578 129 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 MIR573-201ENST00000384964 99 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 MIR520H-201ENST00000385126 88 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 AC015818.7-201ENST00000428754 109 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 AC087499.7-201ENST00000441958 109 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 AL731563.1-201ENST00000442202 214 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 RPS29P1-201ENST00000465274 159 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 RNU6-693P-201ENST00000516134 107 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 RNU6-365P-201ENST00000517113 106 ntBASIC0.52□□□□□ -2.33
SLC28A1O00337 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.52□□□□□ -2.33
SLC28A1O00337 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.51□□□□□ -2.33
SLC28A1O00337 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SLC28A1O00337 UBE2WP1-201ENST00000362030 340 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 Y_RNA.37-201ENST00000362606 108 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 SNORD24-201ENST00000383884 75 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 RNY1P8-201ENST00000383970 114 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 SNORA27-201ENST00000384323 126 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 SNORD38B-201ENST00000384690 67 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 MIR518F-201ENST00000384973 87 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
SLC28A1O00337 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 RNU6-938P-201ENST00000411285 103 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 RNU7-73P-201ENST00000458743 63 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 SNORA18.4-201ENST00000516440 124 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 RNU7-53P-201ENST00000516705 60 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 AC100767.1-201ENST00000528178 123 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 SNORD38B-202ENST00000625943 69 ntBASIC0.51□□□□□ -2.33
SLC28A1O00337 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SLC28A1O00337 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.5□□□□□ -2.33
SLC28A1O00337 Y_RNA.84-201ENST00000363011 104 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 SNORA8.3-201ENST00000384679 139 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 RNU6-1237P-201ENST00000384777 107 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 AC244023.1-201ENST00000426884 112 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 MTCYBP6-201ENST00000441810 138 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 SERF1AP1-201ENST00000514575 187 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 AC242498.1-201ENST00000604134 111 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
SLC28A1O00337 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
SLC28A1O00337 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
SLC28A1O00337 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SLC28A1O00337 Y_RNA.117-201ENST00000363294 101 ntBASIC0.49□□□□□ -2.33
SLC28A1O00337 RNU6-913P-201ENST00000390913 95 ntBASIC0.49□□□□□ -2.33
SLC28A1O00337 RNU6-651P-201ENST00000411040 105 ntBASIC0.49□□□□□ -2.33
SLC28A1O00337 RNU6-177P-201ENST00000411257 104 ntBASIC0.49□□□□□ -2.33
SLC28A1O00337 RPS29P24-201ENST00000486345 171 ntBASIC0.49□□□□□ -2.33
SLC28A1O00337 RNU6-1153P-201ENST00000516760 105 ntBASIC0.49□□□□□ -2.33
SLC28A1O00337 RNU6-1270P-201ENST00000517128 108 ntBASIC0.49□□□□□ -2.33
SLC28A1O00337 MIR6788-201ENST00000618842 66 ntBASIC0.49□□□□□ -2.33
SLC28A1O00337 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SLC28A1O00337 Y_RNA.24-201ENST00000362508 103 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 RNU6-888P-201ENST00000363010 101 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 Y_RNA.229-201ENST00000364347 113 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 RNU6-211P-201ENST00000384047 107 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 SNORD61-201ENST00000384252 73 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 374.8 ms