Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.01□□□□□ -2.41
SMKR1H3BMG3 MIR30D-201ENST00000362283 70 ntBASIC0□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.80-201ENST00000362996 102 ntBASIC0□□□□□ -2.41
SMKR1H3BMG3 SNORA72.1-201ENST00000363485 129 ntBASIC0□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.485-201ENST00000384395 102 ntBASIC0□□□□□ -2.41
SMKR1H3BMG3 RNA5SP193-201ENST00000410353 107 ntBASIC0□□□□□ -2.41
SMKR1H3BMG3 RNU6-130P-201ENST00000411112 103 ntBASIC0□□□□□ -2.41
SMKR1H3BMG3 PART1_1.1-201ENST00000611761 217 ntBASIC0□□□□□ -2.41
SMKR1H3BMG3 MIR367-201ENST00000362299 68 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 SNORA36.1-201ENST00000363424 132 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 SNORD113-8-201ENST00000363497 74 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 SNORA42.1-201ENST00000363515 137 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 SNORD24-201ENST00000383884 75 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 SNORD12C-201ENST00000386307 89 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 MIR1276-201ENST00000408707 83 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 RNU6-126P-201ENST00000516685 103 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 RNU2-31P-201ENST00000516954 155 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 AC040926.1-201ENST00000530195 238 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 MIR4724-201ENST00000579485 89 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 MIR151B-201ENST00000584249 96 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 AL132765.2-201ENST00000610812 351 ntBASIC-0.01□□□□□ -2.41
SMKR1H3BMG3 RNA5SP432-201ENST00000362480 116 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 SNORD77.3-201ENST00000391113 65 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 MIR936-201ENST00000401264 98 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 RNU2-70P-201ENST00000410718 179 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 RNA5SP247-201ENST00000411181 105 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 RNU7-96P-201ENST00000459535 64 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 MRPS35P2-201ENST00000508242 191 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 RNU6-976P-201ENST00000516086 111 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 RNU6-469P-201ENST00000516253 101 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 SNORD36C-201ENST00000516733 66 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 MIR5692C2-201ENST00000577959 77 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 AC139792.2-201ENST00000624218 587 ntBASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 SNORD61-201ENST00000384252 73 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 MIR548A2-201ENST00000384956 97 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 SNORD93-201ENST00000408813 74 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 SEPT7P4-201ENST00000437076 306 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 SNORD19B-201ENST00000459623 84 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 RNU6-365P-201ENST00000517113 106 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 AC100767.1-201ENST00000528178 123 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 MIR924-201ENST00000638017 53 ntBASIC-0.03□□□□□ -2.41
SMKR1H3BMG3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 RNU1-133P-201ENST00000364867 167 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 MIR548I3-201ENST00000408378 149 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 RNU4-83P-201ENST00000410863 133 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 AL512326.2-201ENST00000426359 151 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 HSPE1P25-201ENST00000455484 251 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 RNU2-11P-201ENST00000459191 187 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 MTCO2P24-201ENST00000515611 426 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 RNU6-998P-201ENST00000515894 101 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 RNU6-475P-201ENST00000516073 104 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 AC131281.1-201ENST00000522984 164 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.04□□□□□ -2.42
SMKR1H3BMG3 MIR337-201ENST00000362281 93 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 RNU6-888P-201ENST00000363010 101 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 RNU6-740P-201ENST00000364734 105 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 RNY1P14-201ENST00000384426 108 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 MIR644A-201ENST00000385262 94 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 AL138752.1-201ENST00000452964 351 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 RNU6-504P-201ENST00000516568 104 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 RNA5SP268-201ENST00000516828 124 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 AP003327.1-201ENST00000529684 127 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 MIR376A1-201ENST00000616574 68 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 MIR8066-201ENST00000617280 78 ntBASIC-0.05□□□□□ -2.42
SMKR1H3BMG3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 RNU4-90P-201ENST00000362773 141 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 RNU6-102P-201ENST00000384485 104 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 MIR1302-11-201ENST00000408051 138 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 MIR1302-9-201ENST00000408365 138 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 MIR1302-10-201ENST00000408734 138 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 FGF7P4-201ENST00000509595 295 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 RNA5SP227-201ENST00000516184 113 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms