Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC090897.1-201ENST00000580909 226 ntBASIC0.31□□□□□ -2.36
HMGB1P1B2RPK0 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.31□□□□□ -2.36
HMGB1P1B2RPK0 SNORA40.8-201ENST00000411034 126 ntBASIC0.3□□□□□ -2.36
HMGB1P1B2RPK0 RPS29P24-201ENST00000486345 171 ntBASIC0.3□□□□□ -2.36
HMGB1P1B2RPK0 RNU7-53P-201ENST00000516705 60 ntBASIC0.3□□□□□ -2.36
HMGB1P1B2RPK0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
HMGB1P1B2RPK0 MIR4714-201ENST00000580728 77 ntBASIC0.3□□□□□ -2.36
HMGB1P1B2RPK0 MIR4795-201ENST00000584182 89 ntBASIC0.3□□□□□ -2.36
HMGB1P1B2RPK0 Z97988.1-201ENST00000637697 135 ntBASIC0.3□□□□□ -2.36
HMGB1P1B2RPK0 MIR342-201ENST00000362212 99 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 RNU6-662P-201ENST00000384253 104 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 SNORD12C-201ENST00000386307 89 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 SNORD100-201ENST00000408573 76 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 RNU6-321P-201ENST00000410912 106 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 RNU6-602P-201ENST00000411155 105 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 SNORD77.4-201ENST00000516158 81 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 RNU6-229P-201ENST00000516614 102 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 RNU6-897P-201ENST00000517135 105 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 MIR4498-201ENST00000577599 66 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 RAC1P9-201ENST00000604990 392 ntBASIC0.29□□□□□ -2.36
HMGB1P1B2RPK0 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
HMGB1P1B2RPK0 RNA5SP117-201ENST00000365294 118 ntBASIC0.28□□□□□ -2.36
HMGB1P1B2RPK0 Y_RNA.394-201ENST00000383942 103 ntBASIC0.28□□□□□ -2.36
HMGB1P1B2RPK0 SNORD61-201ENST00000384252 73 ntBASIC0.28□□□□□ -2.36
HMGB1P1B2RPK0 snoU13.2-201ENST00000459201 104 ntBASIC0.28□□□□□ -2.36
HMGB1P1B2RPK0 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
HMGB1P1B2RPK0 RNU6-475P-201ENST00000516073 104 ntBASIC0.28□□□□□ -2.36
HMGB1P1B2RPK0 AC100767.1-201ENST00000528178 123 ntBASIC0.28□□□□□ -2.36
HMGB1P1B2RPK0 AC090574.1-201ENST00000623186 233 ntBASIC0.28□□□□□ -2.36
HMGB1P1B2RPK0 RNU6-1272P-201ENST00000362776 107 ntBASIC0.27□□□□□ -2.37
HMGB1P1B2RPK0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
HMGB1P1B2RPK0 SNORD115-46-201ENST00000390982 71 ntBASIC0.27□□□□□ -2.37
HMGB1P1B2RPK0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.27□□□□□ -2.37
HMGB1P1B2RPK0 PMCHL1-202ENST00000423102 261 ntBASIC0.27□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.715-201ENST00000517082 110 ntBASIC0.27□□□□□ -2.37
HMGB1P1B2RPK0 uc_338.22-201ENST00000622722 187 ntBASIC0.27□□□□□ -2.37
HMGB1P1B2RPK0 MIR369-201ENST00000362155 70 ntBASIC0.26□□□□□ -2.37
HMGB1P1B2RPK0 RNU6-349P-201ENST00000362402 107 ntBASIC0.26□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.105-201ENST00000363182 111 ntBASIC0.26□□□□□ -2.37
HMGB1P1B2RPK0 RNY1P10-201ENST00000363268 113 ntBASIC0.26□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.183-201ENST00000363882 113 ntBASIC0.26□□□□□ -2.37
HMGB1P1B2RPK0 MIR548A2-201ENST00000384956 97 ntBASIC0.26□□□□□ -2.37
HMGB1P1B2RPK0 MIR3678-201ENST00000578455 94 ntBASIC0.26□□□□□ -2.37
HMGB1P1B2RPK0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.25□□□□□ -2.37
HMGB1P1B2RPK0 AC098934.3-201ENST00000430450 190 ntBASIC0.25□□□□□ -2.37
HMGB1P1B2RPK0 MTND4P19-201ENST00000446659 478 ntBASIC0.25□□□□□ -2.37
HMGB1P1B2RPK0 RNU2-11P-201ENST00000459191 187 ntBASIC0.25□□□□□ -2.37
HMGB1P1B2RPK0 MIR4662B-201ENST00000579498 81 ntBASIC0.25□□□□□ -2.37
HMGB1P1B2RPK0 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
HMGB1P1B2RPK0 SNORA25.1-201ENST00000362326 128 ntBASIC0.24□□□□□ -2.37
HMGB1P1B2RPK0 RNU4-73P-201ENST00000363164 141 ntBASIC0.24□□□□□ -2.37
HMGB1P1B2RPK0 RNU6-514P-201ENST00000384208 107 ntBASIC0.24□□□□□ -2.37
HMGB1P1B2RPK0 MTCO2P24-201ENST00000515611 426 ntBASIC0.24□□□□□ -2.37
HMGB1P1B2RPK0 RNU6-365P-201ENST00000517113 106 ntBASIC0.24□□□□□ -2.37
HMGB1P1B2RPK0 SNORD92-201ENST00000585078 85 ntBASIC0.24□□□□□ -2.37
HMGB1P1B2RPK0 uc_338.16-201ENST00000621804 95 ntBASIC0.24□□□□□ -2.37
HMGB1P1B2RPK0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.24□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.112-201ENST00000363250 102 ntBASIC0.23□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.645-201ENST00000391229 102 ntBASIC0.23□□□□□ -2.37
HMGB1P1B2RPK0 MTND5P20-201ENST00000448677 143 ntBASIC0.23□□□□□ -2.37
HMGB1P1B2RPK0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGB1P1B2RPK0 AC133485.4-201ENST00000561835 220 ntBASIC0.23□□□□□ -2.37
HMGB1P1B2RPK0 AC006006.1-201ENST00000603082 144 ntBASIC0.23□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.804-201ENST00000615262 101 ntBASIC0.23□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.31-201ENST00000362574 102 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 SNORA8.2-201ENST00000384372 139 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.572-201ENST00000384757 98 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 MIR23A-201ENST00000385245 73 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 MIR548I3-201ENST00000408378 149 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 AC073261.1-201ENST00000429409 121 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 MTND3P22-201ENST00000510932 243 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 RNU2-31P-201ENST00000516954 155 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 RNU6-448P-201ENST00000517052 107 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 AL133255.1-201ENST00000606374 441 ntBASIC0.22□□□□□ -2.37
HMGB1P1B2RPK0 Y_RNA.24-201ENST00000362508 103 ntBASIC0.21□□□□□ -2.38
HMGB1P1B2RPK0 RNU6-290P-201ENST00000365212 101 ntBASIC0.21□□□□□ -2.38
HMGB1P1B2RPK0 Y_RNA.581-201ENST00000391017 97 ntBASIC0.21□□□□□ -2.38
HMGB1P1B2RPK0 RNU6-823P-201ENST00000391042 103 ntBASIC0.21□□□□□ -2.38
HMGB1P1B2RPK0 RNU6-121P-201ENST00000410525 99 ntBASIC0.21□□□□□ -2.38
HMGB1P1B2RPK0 AF228730.3-201ENST00000436691 102 ntBASIC0.21□□□□□ -2.38
HMGB1P1B2RPK0 AC108729.3-201ENST00000513484 108 ntBASIC0.21□□□□□ -2.38
HMGB1P1B2RPK0 Y_RNA.702-201ENST00000516843 96 ntBASIC0.21□□□□□ -2.38
HMGB1P1B2RPK0 SNORA63.7-201ENST00000365579 123 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 Y_RNA.389-201ENST00000383924 113 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 Y_RNA.419-201ENST00000384041 102 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 MIR215-201ENST00000384858 110 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 SNORD77.3-201ENST00000391113 65 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 SNORD93-201ENST00000408813 74 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 RNU7-45P-201ENST00000459460 63 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 AC037487.3-201ENST00000606668 112 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 Y_RNA.802-201ENST00000614892 130 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 snoU18.1-201ENST00000629629 71 ntBASIC0.2□□□□□ -2.38
HMGB1P1B2RPK0 MIR30D-201ENST00000362283 70 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 Y_RNA.380-201ENST00000365663 111 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 SNORD24-201ENST00000383884 75 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 RNU6-815P-201ENST00000384080 113 ntBASIC0.19□□□□□ -2.38
HMGB1P1B2RPK0 Y_RNA.541-201ENST00000384640 113 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms