Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC005534.2-201ENST00000431047 433 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.47□□□□□ -2.33
CDH9Q9ULB4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.47□□□□□ -2.33
CDH9Q9ULB4 RNU6-1170P-201ENST00000515974 106 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 RNU7-181P-201ENST00000517234 74 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 AC007751.1-201ENST00000529260 376 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.47□□□□□ -2.33
CDH9Q9ULB4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.47□□□□□ -2.33
CDH9Q9ULB4 Z83818.1-201ENST00000603584 150 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 AC124312.5-201ENST00000604451 268 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 MIR376A1-201ENST00000616574 68 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 SNORD45.3-201ENST00000363836 72 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.216-201ENST00000364205 93 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 SNORA63.7-201ENST00000365579 123 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 RNU6-442P-201ENST00000383968 104 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.494-201ENST00000384432 111 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 SNORA2B-201ENST00000384583 137 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
CDH9Q9ULB4 MTCO2P33-201ENST00000402100 465 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 RNU6-613P-201ENST00000410412 108 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.602-201ENST00000410535 92 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 RNU6-383P-201ENST00000410864 94 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 AC024067.1-201ENST00000426199 223 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.711-201ENST00000516993 102 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 RNU6-1137P-201ENST00000517073 99 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.46□□□□□ -2.34
CDH9Q9ULB4 MIR548AO-201ENST00000579992 96 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.46□□□□□ -2.34
CDH9Q9ULB4 AL160413.1-201ENST00000622780 310 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 AC090574.1-201ENST00000623186 233 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 AL589743.1-201ENST00000551932 2712 ntBASIC0.46□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.217-201ENST00000364214 105 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 RNU6-580P-201ENST00000365159 107 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 SNORA22B-201ENST00000383876 138 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.424-201ENST00000384063 103 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 SNORD38C-201ENST00000384381 69 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.535-201ENST00000384612 99 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.569-201ENST00000384749 103 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 RNU6-101P-201ENST00000410323 104 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 RNA5SP222-201ENST00000411039 105 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 RPL21P38-201ENST00000418090 167 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 AC090844.1-201ENST00000422019 156 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.641-201ENST00000459414 105 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 AC020661.2-201ENST00000560114 134 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 AP001094.1-201ENST00000579805 193 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 JPX_2.1-201ENST00000614161 69 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 AC013791.1-201ENST00000616619 62 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 AC007742.2-201ENST00000618226 398 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.45□□□□□ -2.34
CDH9Q9ULB4 MTND1P7-201ENST00000632801 297 ntBASIC0.45□□□□□ -2.34
CDH9Q9ULB4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.44□□□□□ -2.34
CDH9Q9ULB4 MIR1-1-201ENST00000362147 71 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 RNU4-90P-201ENST00000362773 141 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 RNU6-1272P-201ENST00000362776 107 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.61-201ENST00000362835 102 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.153-201ENST00000363615 91 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 RNU6-899P-201ENST00000363947 107 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.431-201ENST00000384086 102 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 SNORA24-201ENST00000384096 131 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.547-201ENST00000384654 119 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 RNU6-938P-201ENST00000411285 103 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 MTND4LP11-201ENST00000422184 280 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 snoU13.21-201ENST00000459368 105 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.631-201ENST00000459607 101 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 RNU7-25P-201ENST00000516544 62 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 MIR2115-201ENST00000516657 100 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 AC113195.1-201ENST00000579952 141 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 MIR2681-201ENST00000581814 105 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 MIR4791-201ENST00000607666 84 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 AL008718.3-201ENST00000610217 321 ntBASIC0.44□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.128-201ENST00000363391 112 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.276-201ENST00000364732 109 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 RNU6-290P-201ENST00000365212 101 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 RNU6-125P-201ENST00000384505 107 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.537-201ENST00000384626 109 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 MIR548A2-201ENST00000384956 97 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 MIR613-201ENST00000385248 95 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.587-201ENST00000391210 103 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 MTCYBP6-201ENST00000441810 138 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 AC091959.1-201ENST00000495857 238 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.43□□□□□ -2.34
CDH9Q9ULB4 MIR4680-201ENST00000580906 66 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.43□□□□□ -2.34
CDH9Q9ULB4 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 AC134503.1-201ENST00000633048 54 ntBASIC0.43□□□□□ -2.34
CDH9Q9ULB4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.16-201ENST00000362421 102 ntBASIC0.42□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.158-201ENST00000363651 101 ntBASIC0.42□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.42□□□□□ -2.34
CDH9Q9ULB4 RNU6-770P-201ENST00000363929 105 ntBASIC0.42□□□□□ -2.34
CDH9Q9ULB4 RNU5E-4P-201ENST00000364931 120 ntBASIC0.42□□□□□ -2.34
CDH9Q9ULB4 RNU6-867P-201ENST00000364956 107 ntBASIC0.42□□□□□ -2.34
CDH9Q9ULB4 RNU6-1138P-201ENST00000365359 106 ntBASIC0.42□□□□□ -2.34
CDH9Q9ULB4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms