Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 AC015726.2-201ENST00000620112 122 ntBASIC1.86□□□□□ -2.11
VSX1Q9NZR4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.86□□□□□ -2.11
VSX1Q9NZR4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VSX1Q9NZR4 SNORD115-34-201ENST00000362441 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-12-201ENST00000362583 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-29-201ENST00000362834 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-9-201ENST00000362912 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-21-201ENST00000362963 81 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-14-201ENST00000363090 81 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-13-201ENST00000363358 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-41-201ENST00000363608 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-11-201ENST00000363616 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-5-201ENST00000363633 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-39-201ENST00000363694 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-4-201ENST00000363810 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-16-201ENST00000363887 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-6-201ENST00000363942 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 RNU6-647P-201ENST00000364243 107 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-42-201ENST00000364273 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-15-201ENST00000364809 81 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-1-201ENST00000364961 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-26-201ENST00000365067 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-10-201ENST00000365073 81 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-43-201ENST00000365503 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-36-201ENST00000365629 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORA20-201ENST00000384662 132 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 RNU2-51P-201ENST00000410708 197 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 AL356320.1-201ENST00000429616 163 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.85□□□□□ -2.11
VSX1Q9NZR4 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 RNU6-1211P-201ENST00000459179 105 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 RNU6-313P-201ENST00000516317 112 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 RNU7-70P-201ENST00000516941 66 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 AP003484.1-201ENST00000530974 250 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 AC090049.2-201ENST00000550377 109 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 SNORD115-40-201ENST00000606510 82 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 MIR6873-201ENST00000622788 63 ntBASIC1.85□□□□□ -2.11
VSX1Q9NZR4 U8.1-201ENST00000362843 134 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 RNA5SP160-201ENST00000364866 120 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 RNA5SP138-201ENST00000365098 114 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 RNU6-1336P-201ENST00000383886 109 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 SNORD116-14-201ENST00000383894 92 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 SNORD116-17-201ENST00000383929 92 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 SNORA70.7-201ENST00000384159 133 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 SNORD116-15-201ENST00000384445 92 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 SNORD116-19-201ENST00000384729 92 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 SNORA3.2-201ENST00000408221 125 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 AC004965.1-201ENST00000413033 213 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 HMGN2P19-201ENST00000425149 265 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 JTBP1-201ENST00000441314 247 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.84□□□□□ -2.11
VSX1Q9NZR4 RNA5SP272-201ENST00000516095 111 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 AC022254.1-201ENST00000567857 235 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
VSX1Q9NZR4 Y_RNA.127-201ENST00000363386 109 ntBASIC1.83□□□□□ -2.12
VSX1Q9NZR4 SNORA2.2-201ENST00000365473 135 ntBASIC1.83□□□□□ -2.12
VSX1Q9NZR4 RNU6-1168P-201ENST00000390831 104 ntBASIC1.83□□□□□ -2.12
VSX1Q9NZR4 RNU6-971P-201ENST00000516920 106 ntBASIC1.83□□□□□ -2.12
VSX1Q9NZR4 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
VSX1Q9NZR4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.83□□□□□ -2.12
VSX1Q9NZR4 MTND5P32-201ENST00000560711 1802 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 Y_RNA.71-201ENST00000362892 104 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 RNA5SP126-201ENST00000365092 109 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 Y_RNA.440-201ENST00000384120 114 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 SNORA64-201ENST00000384674 134 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 MIR194-1-201ENST00000384892 85 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VSX1Q9NZR4 U8.17-201ENST00000391292 132 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 MIR1267-201ENST00000408723 78 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 RNU6-322P-201ENST00000516010 103 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 RNA5SP236-201ENST00000516169 116 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 RNU6-1149P-201ENST00000516810 97 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 SCARNA15-202ENST00000516881 127 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 SNORA18.7-201ENST00000516910 131 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 IGKV3-31-201ENST00000523109 329 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 SNRPGP19-201ENST00000603826 189 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.82□□□□□ -2.12
VSX1Q9NZR4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
VSX1Q9NZR4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
VSX1Q9NZR4 RNU6-1154P-201ENST00000391001 104 ntBASIC1.81□□□□□ -2.12
VSX1Q9NZR4 RNA5SP338-201ENST00000410495 85 ntBASIC1.81□□□□□ -2.12
VSX1Q9NZR4 RNU6-938P-201ENST00000411285 103 ntBASIC1.81□□□□□ -2.12
VSX1Q9NZR4 CYCSP49-201ENST00000420810 319 ntBASIC1.81□□□□□ -2.12
VSX1Q9NZR4 RPL31P63-201ENST00000422565 375 ntBASIC1.81□□□□□ -2.12
VSX1Q9NZR4 AL158147.1-201ENST00000443970 75 ntBASIC1.81□□□□□ -2.12
VSX1Q9NZR4 RNU7-96P-201ENST00000459535 64 ntBASIC1.81□□□□□ -2.12
VSX1Q9NZR4 RPS26P48-201ENST00000491713 339 ntBASIC1.81□□□□□ -2.12
VSX1Q9NZR4 MIR1273D-201ENST00000577266 86 ntBASIC1.81□□□□□ -2.12
VSX1Q9NZR4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.81□□□□□ -2.12
VSX1Q9NZR4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
VSX1Q9NZR4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VSX1Q9NZR4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VSX1Q9NZR4 RNY1P11-201ENST00000363759 113 ntBASIC1.8□□□□□ -2.12
VSX1Q9NZR4 Y_RNA.280-201ENST00000364765 112 ntBASIC1.8□□□□□ -2.12
VSX1Q9NZR4 SNORA27-201ENST00000384323 126 ntBASIC1.8□□□□□ -2.12
VSX1Q9NZR4 RN7SKP192-201ENST00000411291 327 ntBASIC1.8□□□□□ -2.12
VSX1Q9NZR4 RNA5SP508-201ENST00000411327 119 ntBASIC1.8□□□□□ -2.12
VSX1Q9NZR4 AL161935.2-201ENST00000414627 60 ntBASIC1.8□□□□□ -2.12
VSX1Q9NZR4 RPL23AP42-201ENST00000471152 471 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms