Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 MIR1827-201ENST00000408549 66 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 RNU6-121P-201ENST00000410525 99 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 RNU6-733P-201ENST00000410759 104 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 MTCO2P12-201ENST00000427426 682 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 AL035398.1-201ENST00000430869 322 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.641-201ENST00000459414 105 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 RNU7-181P-201ENST00000517234 74 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 MIR4452-201ENST00000583004 71 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 MIR4264-201ENST00000583520 66 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 AC243994.1-201ENST00000618627 109 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 MTND4P29-201ENST00000503122 1372 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.19-201ENST00000362462 99 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.202-201ENST00000364083 110 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.238-201ENST00000364441 102 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 SNORA2B-201ENST00000384583 137 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 SNORA26-201ENST00000391286 122 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 MIR1287-201ENST00000408492 90 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 BTF3P11-201ENST00000426582 477 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 AL731563.1-201ENST00000442202 214 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 RNY3P15-201ENST00000516297 97 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.802-201ENST00000614892 130 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 MTND1P7-201ENST00000632801 297 ntBASIC0.74□□□□□ -2.29
CHCHD3Q9NX63 snoU2_19.2-201ENST00000363024 80 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.214-201ENST00000364201 112 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 SNORA63C-201ENST00000364578 129 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 SNORD24-201ENST00000383884 75 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.541-201ENST00000384640 113 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.547-201ENST00000384654 119 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 MIR518E-201ENST00000385252 88 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 RNA5SP247-201ENST00000411181 105 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 AC113618.1-201ENST00000416747 285 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 ELOCP20-201ENST00000422460 345 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 RNA5SP220-201ENST00000516298 104 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 RNU7-25P-201ENST00000516544 62 ntBASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.73□□□□□ -2.29
CHCHD3Q9NX63 MIR1-1-201ENST00000362147 71 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 RNU6-797P-201ENST00000363101 109 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.105-201ENST00000363182 111 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.293-201ENST00000364908 93 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 RNU6-580P-201ENST00000365159 107 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 AP003733.2-201ENST00000529409 171 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 MIR548AO-201ENST00000579992 96 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 MIR4680-201ENST00000580906 66 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 AL078603.1-201ENST00000603824 313 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 RNU6-94P-201ENST00000607728 107 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 7SK.10-201ENST00000621414 298 ntBASIC0.72□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.210-201ENST00000364161 110 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.226-201ENST00000364337 114 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 RNU6-654P-201ENST00000364373 107 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 RNU6-383P-201ENST00000410864 94 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 SERF1AP1-201ENST00000514575 187 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 MTCO2P24-201ENST00000515611 426 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 AC004817.2-201ENST00000561794 651 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 MIR3171-201ENST00000584270 74 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 AL049861.1-201ENST00000603130 150 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 AC108706.1-201ENST00000611053 297 ntBASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.71□□□□□ -2.3
CHCHD3Q9NX63 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 SNORD115-28-201ENST00000363931 81 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 SNORA8.3-201ENST00000384679 139 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 MIR570-201ENST00000384917 97 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 SNORD105-201ENST00000386910 85 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 SNORA40.5-201ENST00000391061 128 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.587-201ENST00000391210 103 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 SNORD99-201ENST00000408612 74 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 RNU2-55P-201ENST00000411146 174 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 RNU7-73P-201ENST00000458743 63 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 RNU7-53P-201ENST00000516705 60 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 AC006006.1-201ENST00000603082 144 ntBASIC0.7□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.224-201ENST00000364308 111 ntBASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.241-201ENST00000364470 117 ntBASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.394-201ENST00000383942 103 ntBASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 RNY3P5-201ENST00000384127 102 ntBASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 RNU6-42P-201ENST00000384165 107 ntBASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.527-201ENST00000384573 102 ntBASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 RNU6-365P-201ENST00000517113 106 ntBASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 AP000942.4-201ENST00000604811 241 ntBASIC0.69□□□□□ -2.3
CHCHD3Q9NX63 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.68□□□□□ -2.3
CHCHD3Q9NX63 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.138-201ENST00000363462 102 ntBASIC0.68□□□□□ -2.3
CHCHD3Q9NX63 RNU1-93P-201ENST00000364704 169 ntBASIC0.68□□□□□ -2.3
CHCHD3Q9NX63 RNU4-45P-201ENST00000365469 141 ntBASIC0.68□□□□□ -2.3
CHCHD3Q9NX63 RPL21P38-201ENST00000418090 167 ntBASIC0.68□□□□□ -2.3
CHCHD3Q9NX63 RPS26P5-201ENST00000418544 335 ntBASIC0.68□□□□□ -2.3
CHCHD3Q9NX63 AC020661.2-201ENST00000560114 134 ntBASIC0.68□□□□□ -2.3
CHCHD3Q9NX63 AL008718.3-201ENST00000610217 321 ntBASIC0.68□□□□□ -2.3
CHCHD3Q9NX63 AC134878.1-201ENST00000619901 243 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms