Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL021707.8-201ENST00000609428 183 ntBASIC0.43□□□□□ -2.34
HMG20AQ9NP66 uc_338.6-201ENST00000613544 171 ntBASIC0.43□□□□□ -2.34
HMG20AQ9NP66 AC013791.1-201ENST00000616619 62 ntBASIC0.43□□□□□ -2.34
HMG20AQ9NP66 RNU4-90P-201ENST00000362773 141 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 Y_RNA.389-201ENST00000383924 113 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 RNU6-1067P-201ENST00000384752 107 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 RNU6-1248P-201ENST00000391096 64 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 MIR1287-201ENST00000408492 90 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 MIR1252-201ENST00000408861 65 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 RNU6-847P-201ENST00000411115 108 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 RPL21P38-201ENST00000418090 167 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 RNA5SP121-201ENST00000516537 101 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 uc_338.4-201ENST00000616635 176 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 MIR6788-201ENST00000618842 66 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 MIR6734-201ENST00000621166 68 ntBASIC0.42□□□□□ -2.34
HMG20AQ9NP66 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
HMG20AQ9NP66 Y_RNA.16-201ENST00000362421 102 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 Y_RNA.28-201ENST00000362554 111 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 RNU6-1272P-201ENST00000362776 107 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 Y_RNA.214-201ENST00000364201 112 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 Y_RNA.216-201ENST00000364205 93 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 RNU6-580P-201ENST00000365159 107 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 Y_RNA.486-201ENST00000384398 107 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 Y_RNA.572-201ENST00000384757 98 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 Y_RNA.581-201ENST00000391017 97 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.41□□□□□ -2.34
HMG20AQ9NP66 AL117351.2-201ENST00000513571 157 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.41□□□□□ -2.34
HMG20AQ9NP66 MIR5692C2-201ENST00000577959 77 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 AL512605.2-201ENST00000592972 256 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 AL136317.1-201ENST00000612653 226 ntBASIC0.41□□□□□ -2.34
HMG20AQ9NP66 Y_RNA.138-201ENST00000363462 102 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 Y_RNA.238-201ENST00000364441 102 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 Y_RNA.241-201ENST00000364470 117 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RNU6-934P-201ENST00000365154 107 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 SNORA1.2-201ENST00000365189 134 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 SNORA63.7-201ENST00000365579 123 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RNU6-144P-201ENST00000383951 107 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RNU6-42P-201ENST00000384165 107 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RNU6-913P-201ENST00000390913 95 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RNU6-101P-201ENST00000410323 104 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RNU6-938P-201ENST00000411285 103 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 BTF3P11-201ENST00000426582 477 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 AC091959.1-201ENST00000495857 238 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RNU6-958P-201ENST00000516995 106 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RNU6-1223P-201ENST00000517124 104 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.4□□□□□ -2.35
HMG20AQ9NP66 MIR4771-2-201ENST00000577758 74 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 MIR4771-1-201ENST00000582617 74 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 AC020891.4-201ENST00000605745 93 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 AL008718.3-201ENST00000610217 321 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 RMST_2.1-201ENST00000617263 136 ntBASIC0.4□□□□□ -2.35
HMG20AQ9NP66 Y_RNA.226-201ENST00000364337 114 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 Y_RNA.293-201ENST00000364908 93 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 RNU6-290P-201ENST00000365212 101 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 SNORA22B-201ENST00000383876 138 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 Y_RNA.527-201ENST00000384573 102 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 MIR520H-201ENST00000385126 88 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 MIR548J-201ENST00000408833 112 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 RNA5SP247-201ENST00000411181 105 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 HMGN1P33-201ENST00000432945 451 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 MTND5P22-201ENST00000458380 195 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 RNU7-67P-201ENST00000459003 62 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 SCARNA8-201ENST00000515924 131 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 RNY3P15-201ENST00000516297 97 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 RNU6-1007P-201ENST00000516586 107 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 MIR5000-201ENST00000577717 103 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 snoU18.1-201ENST00000629629 71 ntBASIC0.39□□□□□ -2.35
HMG20AQ9NP66 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
HMG20AQ9NP66 MIR367-201ENST00000362299 68 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 Y_RNA.14-201ENST00000362415 103 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 RNA5SP347-201ENST00000362445 119 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 Y_RNA.19-201ENST00000362462 99 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 Y_RNA.64-201ENST00000362845 102 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 RNU6-770P-201ENST00000363929 105 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 SNORA24-201ENST00000384096 131 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 MIR520F-201ENST00000384824 87 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 MIR548A2-201ENST00000384956 97 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 MIR518F-201ENST00000384973 87 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 MIR518E-201ENST00000385252 88 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 MT-TN-201ENST00000387400 73 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 Y_RNA.587-201ENST00000391210 103 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 RNU6-977P-201ENST00000516411 103 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 SNORA18.4-201ENST00000516440 124 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 RNU2-31P-201ENST00000516954 155 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.38□□□□□ -2.35
HMG20AQ9NP66 AP000753.3-201ENST00000604083 169 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 AC134878.1-201ENST00000619901 243 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
HMG20AQ9NP66 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms