Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 uc_338.22-201ENST00000622722 187 ntBASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 MIR1-1-201ENST00000362147 71 ntBASIC0.58□□□□□ -2.32
RPAP3Q9H6T3 RNY1P8-201ENST00000383970 114 ntBASIC0.58□□□□□ -2.32
RPAP3Q9H6T3 RNU6-763P-201ENST00000390865 106 ntBASIC0.58□□□□□ -2.32
RPAP3Q9H6T3 RNU1-119P-201ENST00000391122 165 ntBASIC0.58□□□□□ -2.32
RPAP3Q9H6T3 AC244098.3-201ENST00000424803 96 ntBASIC0.58□□□□□ -2.32
RPAP3Q9H6T3 RNU6-764P-201ENST00000516396 105 ntBASIC0.58□□□□□ -2.32
RPAP3Q9H6T3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.58□□□□□ -2.32
RPAP3Q9H6T3 AC104695.3-201ENST00000604052 296 ntBASIC0.58□□□□□ -2.32
RPAP3Q9H6T3 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 RNU6-899P-201ENST00000363947 107 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.242-201ENST00000364473 110 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 SNORA1.2-201ENST00000365189 134 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 SNORA36.2-201ENST00000384004 127 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.494-201ENST00000384432 111 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 AC090844.1-201ENST00000422019 156 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 HSPE1P25-201ENST00000455484 251 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 RNU7-25P-201ENST00000516544 62 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 AC124312.5-201ENST00000604451 268 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 MIR376A1-201ENST00000616574 68 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.395-201ENST00000383945 109 ntBASIC0.56□□□□□ -2.32
RPAP3Q9H6T3 SNORD105-201ENST00000386910 85 ntBASIC0.56□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.645-201ENST00000391229 102 ntBASIC0.56□□□□□ -2.32
RPAP3Q9H6T3 SNORD83.1-201ENST00000411362 77 ntBASIC0.56□□□□□ -2.32
RPAP3Q9H6T3 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
RPAP3Q9H6T3 RNU2-13P-201ENST00000515909 113 ntBASIC0.56□□□□□ -2.32
RPAP3Q9H6T3 SCARNA8-201ENST00000515924 131 ntBASIC0.56□□□□□ -2.32
RPAP3Q9H6T3 AC243994.1-201ENST00000618627 109 ntBASIC0.56□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.136-201ENST00000363444 102 ntBASIC0.55□□□□□ -2.32
RPAP3Q9H6T3 SNORD45.3-201ENST00000363836 72 ntBASIC0.55□□□□□ -2.32
RPAP3Q9H6T3 RNU6-125P-201ENST00000384505 107 ntBASIC0.55□□□□□ -2.32
RPAP3Q9H6T3 RNU6-847P-201ENST00000411115 108 ntBASIC0.55□□□□□ -2.32
RPAP3Q9H6T3 MTND4P19-201ENST00000446659 478 ntBASIC0.55□□□□□ -2.32
RPAP3Q9H6T3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.55□□□□□ -2.32
RPAP3Q9H6T3 RNU6-1170P-201ENST00000515974 106 ntBASIC0.55□□□□□ -2.32
RPAP3Q9H6T3 RNU6-897P-201ENST00000517135 105 ntBASIC0.55□□□□□ -2.32
RPAP3Q9H6T3 AL049861.1-201ENST00000603130 150 ntBASIC0.55□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.105-201ENST00000363182 111 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 RNU6-1205P-201ENST00000363625 106 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 RNU6-144P-201ENST00000383951 107 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.445-201ENST00000384168 102 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.547-201ENST00000384654 119 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.569-201ENST00000384749 103 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 MT-TD-201ENST00000387419 68 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 SNORD115-46-201ENST00000390982 71 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.666-201ENST00000516187 112 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 C8orf59P2-201ENST00000603441 271 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 RAC1P9-201ENST00000604990 392 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 AC022140.2-201ENST00000623500 188 ntBASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
RPAP3Q9H6T3 RNU6-369P-201ENST00000362515 102 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 RNU4-90P-201ENST00000362773 141 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.183-201ENST00000363882 113 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 RNU6-580P-201ENST00000365159 107 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 SNORA63.7-201ENST00000365579 123 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 MT-TN-201ENST00000387400 73 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 MTCO1P5-201ENST00000433573 344 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 Y_RNA.637-201ENST00000459424 114 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 RNU7-149P-201ENST00000516739 59 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 Z83818.1-201ENST00000603584 150 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 AC090971.5-201ENST00000621102 293 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 AC090574.1-201ENST00000623186 233 ntBASIC0.53□□□□□ -2.32
RPAP3Q9H6T3 MIR377-201ENST00000362145 69 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 SNORD42.2-201ENST00000365570 69 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 MIR548O-201ENST00000408583 114 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 AC023449.1-201ENST00000454464 154 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.715-201ENST00000517082 110 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 AC013791.1-201ENST00000616619 62 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 uc_338.4-201ENST00000616635 176 ntBASIC0.52□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.241-201ENST00000364470 117 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 RNU6-934P-201ENST00000365154 107 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.394-201ENST00000383942 103 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 RNU6-823P-201ENST00000391042 103 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 RNU6-121P-201ENST00000410525 99 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 AL358176.2-201ENST00000425769 204 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.639-201ENST00000458981 102 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 RNU7-67P-201ENST00000459003 62 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 RNU6-958P-201ENST00000516995 106 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 RNA5SP330-201ENST00000517096 96 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 MIR4771-2-201ENST00000577758 74 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 MIR4771-1-201ENST00000582617 74 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 AP000753.3-201ENST00000604083 169 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 AL021707.8-201ENST00000609428 183 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 MIR924-201ENST00000638017 53 ntBASIC0.51□□□□□ -2.33
RPAP3Q9H6T3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 RNU4-10P-201ENST00000364383 140 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms