Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
PIF1Q9H611 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PIF1Q9H611 RNU6-597P-201ENST00000365620 102 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 Y_RNA.441-201ENST00000384123 112 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 Y_RNA.521-201ENST00000384560 114 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 Y_RNA.537-201ENST00000384626 109 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 RNU6-239P-201ENST00000390990 99 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 AL627390.1-201ENST00000396055 340 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 RNA5SP508-201ENST00000411327 119 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.95□□□□□ -2.1
PIF1Q9H611 SUMO1P3-201ENST00000439961 304 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 RNU6-255P-201ENST00000516957 105 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 MIR3144-201ENST00000579460 79 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 MIR4764-201ENST00000580680 88 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 AC021753.1-201ENST00000635724 168 ntBASIC1.95□□□□□ -2.1
PIF1Q9H611 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
PIF1Q9H611 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PIF1Q9H611 Y_RNA.37-201ENST00000362606 108 ntBASIC1.94□□□□□ -2.1
PIF1Q9H611 Y_RNA.272-201ENST00000364696 102 ntBASIC1.94□□□□□ -2.1
PIF1Q9H611 SNORA40.5-201ENST00000391061 128 ntBASIC1.94□□□□□ -2.1
PIF1Q9H611 RNU6-394P-201ENST00000410735 107 ntBASIC1.94□□□□□ -2.1
PIF1Q9H611 RN7SKP88-201ENST00000516847 250 ntBASIC1.94□□□□□ -2.1
PIF1Q9H611 MIR3646-201ENST00000578301 84 ntBASIC1.94□□□□□ -2.1
PIF1Q9H611 7SK.8-201ENST00000612110 250 ntBASIC1.94□□□□□ -2.1
PIF1Q9H611 7SK.11-201ENST00000615477 250 ntBASIC1.94□□□□□ -2.1
PIF1Q9H611 7SK.13-201ENST00000622040 250 ntBASIC1.94□□□□□ -2.1
PIF1Q9H611 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PIF1Q9H611 RNU4-84P-201ENST00000364200 139 ntBASIC1.93□□□□□ -2.1
PIF1Q9H611 RNU6-1189P-201ENST00000383958 107 ntBASIC1.93□□□□□ -2.1
PIF1Q9H611 MIR548A2-201ENST00000384956 97 ntBASIC1.93□□□□□ -2.1
PIF1Q9H611 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.93□□□□□ -2.1
PIF1Q9H611 RNU6-1212P-201ENST00000517023 104 ntBASIC1.93□□□□□ -2.1
PIF1Q9H611 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
PIF1Q9H611 MIR8065-201ENST00000620577 100 ntBASIC1.93□□□□□ -2.1
PIF1Q9H611 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
PIF1Q9H611 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PIF1Q9H611 RNU6-978P-201ENST00000364371 103 ntBASIC1.92□□□□□ -2.1
PIF1Q9H611 Y_RNA.393-201ENST00000383936 102 ntBASIC1.92□□□□□ -2.1
PIF1Q9H611 Y_RNA.398-201ENST00000383952 99 ntBASIC1.92□□□□□ -2.1
PIF1Q9H611 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.92□□□□□ -2.1
PIF1Q9H611 AP003484.1-201ENST00000530974 250 ntBASIC1.92□□□□□ -2.1
PIF1Q9H611 MIR6873-201ENST00000622788 63 ntBASIC1.92□□□□□ -2.1
PIF1Q9H611 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PIF1Q9H611 RNU6-774P-201ENST00000363238 107 ntBASIC1.91□□□□□ -2.1
PIF1Q9H611 Y_RNA.170-201ENST00000363746 110 ntBASIC1.91□□□□□ -2.1
PIF1Q9H611 Y_RNA.241-201ENST00000364470 117 ntBASIC1.91□□□□□ -2.1
PIF1Q9H611 SNORD116-18-201ENST00000383961 92 ntBASIC1.91□□□□□ -2.1
PIF1Q9H611 AL603908.1-201ENST00000406098 201 ntBASIC1.91□□□□□ -2.1
PIF1Q9H611 MIR548M-201ENST00000408260 86 ntBASIC1.91□□□□□ -2.1
PIF1Q9H611 RNA5SP127-201ENST00000411051 133 ntBASIC1.91□□□□□ -2.1
PIF1Q9H611 MTND5P41-201ENST00000517498 206 ntBASIC1.91□□□□□ -2.1
PIF1Q9H611 AC007751.1-201ENST00000529260 376 ntBASIC1.91□□□□□ -2.1
PIF1Q9H611 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.91□□□□□ -2.1
PIF1Q9H611 RNU6-1130P-201ENST00000365434 107 ntBASIC1.9□□□□□ -2.11
PIF1Q9H611 RNU6-449P-201ENST00000383914 107 ntBASIC1.9□□□□□ -2.11
PIF1Q9H611 SNORA3.2-201ENST00000408221 125 ntBASIC1.9□□□□□ -2.11
PIF1Q9H611 RN7SKP223-201ENST00000410582 62 ntBASIC1.9□□□□□ -2.11
PIF1Q9H611 Z98742.3-201ENST00000418637 326 ntBASIC1.9□□□□□ -2.11
PIF1Q9H611 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
PIF1Q9H611 SNORA18.4-201ENST00000516440 124 ntBASIC1.9□□□□□ -2.11
PIF1Q9H611 MIR548AR-201ENST00000582191 57 ntBASIC1.9□□□□□ -2.11
PIF1Q9H611 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
PIF1Q9H611 AC008133.2-201ENST00000624540 351 ntBASIC1.9□□□□□ -2.11
PIF1Q9H611 MIR624-201ENST00000385217 97 ntBASIC1.89□□□□□ -2.11
PIF1Q9H611 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PIF1Q9H611 AL133373.1-201ENST00000497098 94 ntBASIC1.89□□□□□ -2.11
PIF1Q9H611 RNU7-181P-201ENST00000517234 74 ntBASIC1.89□□□□□ -2.11
PIF1Q9H611 IGKV3-31-201ENST00000523109 329 ntBASIC1.89□□□□□ -2.11
PIF1Q9H611 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
PIF1Q9H611 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
PIF1Q9H611 AP001485.1-201ENST00000604799 199 ntBASIC1.89□□□□□ -2.11
PIF1Q9H611 Y_RNA.454-201ENST00000384224 113 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 SNORA27-201ENST00000384323 126 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 SNORA51.10-201ENST00000384418 136 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 RNU6-1054P-201ENST00000411293 104 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 AF228730.3-201ENST00000436691 102 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 RNU7-80P-201ENST00000459562 61 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 SNORA31.4-201ENST00000516049 129 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 RNU6-947P-201ENST00000516264 106 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 RNU6-970P-201ENST00000516312 107 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 RNU7-121P-201ENST00000516604 62 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 RNU7-53P-201ENST00000516705 60 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 AC012493.3-201ENST00000604494 112 ntBASIC1.88□□□□□ -2.11
PIF1Q9H611 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.88□□□□□ -2.11
PIF1Q9H611 Y_RNA.506-201ENST00000384494 102 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 Y_RNA.580-201ENST00000391004 95 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 SNORA75.5-201ENST00000391291 81 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 RNU7-96P-201ENST00000459535 64 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 AC090821.2-201ENST00000523552 176 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 MIR3133-201ENST00000583157 78 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 DNAJC19P2-201ENST00000593340 302 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 MTND1P7-201ENST00000632801 297 ntBASIC1.87□□□□□ -2.11
PIF1Q9H611 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PIF1Q9H611 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PIF1Q9H611 RNU6-151P-201ENST00000364158 107 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 RNU6-746P-201ENST00000384112 109 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms