Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL022345.2-201ENST00000606307 135 ntBASIC1.07□□□□□ -2.24
CDCA3Q99618 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CDCA3Q99618 Pinc.1-201ENST00000616452 154 ntBASIC1.07□□□□□ -2.24
CDCA3Q99618 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 SNORA8.3-201ENST00000384679 139 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 MIR618-201ENST00000385287 98 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 MIR526A2-201ENST00000390198 65 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 Y_RNA.587-201ENST00000391210 103 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 AL078595.1-201ENST00000404458 226 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 AC245047.8-201ENST00000456455 284 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 snoU13.25-201ENST00000458945 104 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 RNU7-41P-201ENST00000515917 61 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 RN7SKP164-201ENST00000516138 266 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.06□□□□□ -2.24
CDCA3Q99618 CYP3A137P-201ENST00000562436 69 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 MIR548AR-201ENST00000582191 57 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 BX284668.6-201ENST00000606899 438 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 AL021707.8-201ENST00000609428 183 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 U2.14-201ENST00000615943 113 ntBASIC1.06□□□□□ -2.24
CDCA3Q99618 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
CDCA3Q99618 RNA5SP325-201ENST00000363756 130 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 Y_RNA.242-201ENST00000364473 110 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 Y_RNA.363-201ENST00000365529 113 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 Y_RNA.590-201ENST00000410140 107 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.05□□□□□ -2.24
CDCA3Q99618 MTCO2P24-201ENST00000515611 426 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 RNU6-1045P-201ENST00000516321 107 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 Y_RNA.679-201ENST00000516416 91 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 RNU7-43P-201ENST00000516554 64 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 AC012433.1-201ENST00000588916 398 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 AC006441.5-201ENST00000612680 209 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 AC015726.2-201ENST00000620112 122 ntBASIC1.05□□□□□ -2.24
CDCA3Q99618 Y_RNA.54-201ENST00000362766 105 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 Y_RNA.133-201ENST00000363428 110 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 RNU1-133P-201ENST00000364867 167 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 MIR626-201ENST00000385032 94 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CDCA3Q99618 SNORD28B-201ENST00000390993 75 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 U8.17-201ENST00000391292 132 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.04□□□□□ -2.24
CDCA3Q99618 RNU6-830P-201ENST00000516353 107 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 MIR5688-201ENST00000580619 83 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 PRELID3BP2-201ENST00000605362 201 ntBASIC1.04□□□□□ -2.24
CDCA3Q99618 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CDCA3Q99618 AL442644.1-201ENST00000454390 3105 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.82-201ENST00000363000 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.92-201ENST00000363043 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 SNORA25.3-201ENST00000363205 127 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.235-201ENST00000364412 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.306-201ENST00000365015 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.312-201ENST00000365089 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.322-201ENST00000365151 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 MIR568-201ENST00000385036 95 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.650-201ENST00000459002 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.777-201ENST00000516982 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 RNA5SP404-201ENST00000517118 132 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 RNU7-181P-201ENST00000517234 74 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 MIR4643-201ENST00000577473 78 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 RN7SL793P-201ENST00000583259 296 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.771-201ENST00000598668 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 AL391903.3-201ENST00000612158 163 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.789-201ENST00000622480 102 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
CDCA3Q99618 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.03□□□□□ -2.24
CDCA3Q99618 Y_RNA.229-201ENST00000364347 113 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 Y_RNA.277-201ENST00000364754 102 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 Y_RNA.486-201ENST00000384398 107 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 MIR570-201ENST00000384917 97 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 RNU2-38P-201ENST00000410856 79 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 MTCYBP9-201ENST00000431021 303 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.02□□□□□ -2.25
CDCA3Q99618 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.02□□□□□ -2.25
CDCA3Q99618 SNORD2.1-201ENST00000458762 69 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 SNORD127-201ENST00000458892 86 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.02□□□□□ -2.25
CDCA3Q99618 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.02□□□□□ -2.25
CDCA3Q99618 SNORD79.1-201ENST00000516069 84 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 Y_RNA.666-201ENST00000516187 112 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 AL353621.2-201ENST00000605340 133 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 AC099654.10-201ENST00000640395 161 ntBASIC1.02□□□□□ -2.25
CDCA3Q99618 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CDCA3Q99618 RNA5SP264-201ENST00000363115 107 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 Y_RNA.205-201ENST00000364128 113 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 Y_RNA.288-201ENST00000364854 92 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 RNU6-1138P-201ENST00000365359 106 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 Y_RNA.352-201ENST00000365439 102 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 Y_RNA.416-201ENST00000384014 113 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.01□□□□□ -2.25
CDCA3Q99618 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.01□□□□□ -2.25
CDCA3Q99618 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 RPS26P48-201ENST00000491713 339 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.01□□□□□ -2.25
CDCA3Q99618 RNA5SP436-201ENST00000516020 115 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 SNORD77.4-201ENST00000516158 81 ntBASIC1.01□□□□□ -2.25
CDCA3Q99618 MIR3973-201ENST00000579824 107 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 1143.9 ms