Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 AC108059.2-201ENST00000434626 151 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 MIR4491-201ENST00000581087 68 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 MIR2681-201ENST00000581814 105 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 AC105081.1-201ENST00000617727 106 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 AC084368.1-201ENST00000620935 65 ntBASIC-0.66□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 RNU6-674P-201ENST00000363831 107 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 SNORA27-201ENST00000384323 126 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 MIR548I3-201ENST00000408378 149 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 SEPT14P3-201ENST00000439401 183 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 AL732372.2-207ENST00000445840 183 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 SEPT14P2-201ENST00000453405 183 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 MTND3P7-201ENST00000474435 343 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 RPS29P24-201ENST00000486345 171 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 SEPT14P4-201ENST00000513445 186 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 RNU7-115P-201ENST00000516433 55 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 FO082796.1-201ENST00000523795 183 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 AC060780.3-201ENST00000589464 80 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 AC024933.1-201ENST00000608472 348 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 AL662814.1-201ENST00000617364 121 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 MIR548AY-201ENST00000617669 107 ntBASIC-0.67□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 RNU4-73P-201ENST00000363164 141 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 SNORA63.5-201ENST00000363548 123 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 RNA5SP245-201ENST00000364239 121 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 RNU6-811P-201ENST00000384069 107 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 RNU6-710P-201ENST00000410424 105 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 RNA5SP451-201ENST00000410588 110 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 AC244250.2-201ENST00000418731 148 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 SNORD11-201ENST00000459124 84 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 RNU6-437P-201ENST00000459408 95 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 SNORA25.16-201ENST00000516741 121 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 MIR4432-201ENST00000581823 84 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 AL080274.1-201ENST00000605565 220 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 MIR1244-1-201ENST00000612829 85 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 AC022960.3-201ENST00000619794 441 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 AL162376.1-201ENST00000624117 175 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 MIR1244-3-201ENST00000635744 85 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 MIR1244-2-201ENST00000636449 85 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 MIR1244-4-202ENST00000636813 85 ntBASIC-0.68□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 SNORD115-24-201ENST00000363528 82 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 SNORD115-28-201ENST00000363931 81 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 RNU4-75P-201ENST00000364621 146 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 RNU6-726P-201ENST00000364680 107 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 RNU6-597P-201ENST00000365620 102 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 RNU6-20P-201ENST00000384106 107 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 SNORA75-201ENST00000384158 137 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 MIR604-201ENST00000384880 94 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 SNORA40.5-201ENST00000391061 128 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 MTND4P19-201ENST00000446659 478 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 RNU2-11P-201ENST00000459191 187 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 RPL7P42-201ENST00000481005 679 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 NAMPTP3-201ENST00000569273 224 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 AC087752.4-201ENST00000605911 462 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 AL603755.1-201ENST00000619504 163 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 MIR6863-201ENST00000636112 90 ntBASIC-0.69□□□□□ -2.52
LYSMD1Q96S90 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.7□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.7□□□□□ -2.52
LYSMD1Q96S90 AC098826.2-201ENST00000452011 651 ntBASIC-0.7□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.7□□□□□ -2.52
LYSMD1Q96S90 AC007751.1-201ENST00000529260 376 ntBASIC-0.7□□□□□ -2.52
LYSMD1Q96S90 AC073114.1-201ENST00000612027 490 ntBASIC-0.7□□□□□ -2.52
LYSMD1Q96S90 DISC2.1-201ENST00000612827 205 ntBASIC-0.7□□□□□ -2.52
LYSMD1Q96S90 RN7SL660P-201ENST00000614852 299 ntBASIC-0.7□□□□□ -2.52
LYSMD1Q96S90 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.7□□□□□ -2.52
LYSMD1Q96S90 MIR342-201ENST00000362212 99 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 RNU6-490P-201ENST00000362985 107 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 RNU6-626P-201ENST00000363354 107 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 SNORA25.7-201ENST00000364375 127 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 SNORD116-9-201ENST00000384000 95 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 SNORA1-201ENST00000384107 130 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 SNORD116-3-201ENST00000384287 95 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 SNORD116-8-201ENST00000384365 95 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 SNORD116-7-201ENST00000384404 95 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 SNORD116-5-201ENST00000384462 95 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 AF228730.4-201ENST00000421457 183 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 AC109327.2-201ENST00000448339 378 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 SNORD5.1-201ENST00000458800 75 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 RNU7-104P-201ENST00000459398 79 ntBASIC-0.71□□□□□ -2.52
LYSMD1Q96S90 AP003072.1-201ENST00000531740 145 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms