Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC068700.1-201ENST00000565862 3754 ntBASIC0.67□□□□□ -2.3
LSMEM1Q8N8F7 SNORA63C-201ENST00000364578 129 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 RNU6-450P-201ENST00000364654 107 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 RNU6-580P-201ENST00000365159 107 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 Y_RNA.419-201ENST00000384041 102 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 Y_RNA.645-201ENST00000391229 102 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 RNU6-383P-201ENST00000410864 94 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 AC244098.3-201ENST00000424803 96 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 RNA5SP102-201ENST00000516865 106 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 MIR5688-201ENST00000580619 83 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 AL049861.1-201ENST00000603130 150 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 AC134878.1-201ENST00000619901 243 ntBASIC0.66□□□□□ -2.3
LSMEM1Q8N8F7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 MIR96-201ENST00000362288 78 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-1272P-201ENST00000362776 107 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 RNU1-93P-201ENST00000364704 169 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-934P-201ENST00000365154 107 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.460-201ENST00000384255 102 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 MIR520E-201ENST00000384867 87 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.631-201ENST00000459607 101 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-977P-201ENST00000516411 103 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 AL021707.8-201ENST00000609428 183 ntBASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
LSMEM1Q8N8F7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LSMEM1Q8N8F7 SNORD115-28-201ENST00000363931 81 ntBASIC0.64□□□□□ -2.31
LSMEM1Q8N8F7 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
LSMEM1Q8N8F7 PMCHL1-202ENST00000423102 261 ntBASIC0.64□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.637-201ENST00000459424 114 ntBASIC0.64□□□□□ -2.31
LSMEM1Q8N8F7 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
LSMEM1Q8N8F7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.64□□□□□ -2.31
LSMEM1Q8N8F7 AL160413.1-201ENST00000622780 310 ntBASIC0.64□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.31-201ENST00000362574 102 ntBASIC0.63□□□□□ -2.31
LSMEM1Q8N8F7 SNORA24-201ENST00000384096 131 ntBASIC0.63□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-205P-201ENST00000390858 107 ntBASIC0.63□□□□□ -2.31
LSMEM1Q8N8F7 MTND4LP11-201ENST00000422184 280 ntBASIC0.63□□□□□ -2.31
LSMEM1Q8N8F7 BTF3P11-201ENST00000426582 477 ntBASIC0.63□□□□□ -2.31
LSMEM1Q8N8F7 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
LSMEM1Q8N8F7 RNU7-53P-201ENST00000516705 60 ntBASIC0.63□□□□□ -2.31
LSMEM1Q8N8F7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.63□□□□□ -2.31
LSMEM1Q8N8F7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.128-201ENST00000363391 112 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-770P-201ENST00000363929 105 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.276-201ENST00000364732 109 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 RNU4-45P-201ENST00000365469 141 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 MIR526A2-201ENST00000390198 65 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 SNORA40.5-201ENST00000391061 128 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 SNORA26-201ENST00000391286 122 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 MTATP6P23-201ENST00000440153 476 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 SNORD77.4-201ENST00000516158 81 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.666-201ENST00000516187 112 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 RNY3P15-201ENST00000516297 97 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.802-201ENST00000614892 130 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
LSMEM1Q8N8F7 MIR337-201ENST00000362281 93 ntBASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 SNORD38B-201ENST00000384690 67 ntBASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 MIR520F-201ENST00000384824 87 ntBASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 AC091959.1-201ENST00000495857 238 ntBASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 AL117351.2-201ENST00000513571 157 ntBASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 SNORA27.4-201ENST00000516650 95 ntBASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-958P-201ENST00000516995 106 ntBASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 AC006006.1-201ENST00000603082 144 ntBASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 SNORD38B-202ENST00000625943 69 ntBASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-125P-201ENST00000384505 107 ntBASIC0.6□□□□□ -2.31
LSMEM1Q8N8F7 RNU7-73P-201ENST00000458743 63 ntBASIC0.6□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-365P-201ENST00000517113 106 ntBASIC0.6□□□□□ -2.31
LSMEM1Q8N8F7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.6□□□□□ -2.31
LSMEM1Q8N8F7 AP000942.4-201ENST00000604811 241 ntBASIC0.6□□□□□ -2.31
LSMEM1Q8N8F7 RMST_2.1-201ENST00000617263 136 ntBASIC0.6□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.19-201ENST00000362462 99 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 RNA5SP432-201ENST00000362480 116 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 Y_RNA.455-201ENST00000384230 98 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 MIR573-201ENST00000384964 99 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 MIR520H-201ENST00000385126 88 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 RNU7-62P-201ENST00000458856 62 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 RNU6-693P-201ENST00000516134 107 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 MIR4771-2-201ENST00000577758 74 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 MIR4771-1-201ENST00000582617 74 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 AC134503.1-201ENST00000633048 54 ntBASIC0.59□□□□□ -2.31
LSMEM1Q8N8F7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 Y_RNA.158-201ENST00000363651 101 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 SNORD45.3-201ENST00000363836 72 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 SNORD24-201ENST00000383884 75 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 Y_RNA.394-201ENST00000383942 103 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 Y_RNA.509-201ENST00000384506 99 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 Y_RNA.587-201ENST00000391210 103 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 MIR1276-201ENST00000408707 83 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 AL731563.1-201ENST00000442202 214 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 MTCO2P24-201ENST00000515611 426 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 AC131281.1-201ENST00000522984 164 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 AC100767.1-201ENST00000528178 123 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
LSMEM1Q8N8F7 RNU6-662P-201ENST00000384253 104 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms