Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 Y_RNA.136-201ENST00000363444 102 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-41-201ENST00000363608 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-11-201ENST00000363616 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-5-201ENST00000363633 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-39-201ENST00000363694 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-4-201ENST00000363810 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-16-201ENST00000363887 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-6-201ENST00000363942 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 Y_RNA.222-201ENST00000364264 102 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-42-201ENST00000364273 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-15-201ENST00000364809 81 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-1-201ENST00000364961 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-26-201ENST00000365067 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-10-201ENST00000365073 81 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-43-201ENST00000365503 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-36-201ENST00000365629 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 MIR140-201ENST00000385282 100 ntBASIC0.34□□□□□ -2.36
IRX3P78415 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.34□□□□□ -2.36
IRX3P78415 RNU6-977P-201ENST00000516411 103 ntBASIC0.34□□□□□ -2.36
IRX3P78415 MIR548AO-201ENST00000579992 96 ntBASIC0.34□□□□□ -2.36
IRX3P78415 SNORD115-40-201ENST00000606510 82 ntBASIC0.34□□□□□ -2.36
IRX3P78415 RNU6-801P-201ENST00000364087 105 ntBASIC0.33□□□□□ -2.36
IRX3P78415 RNU4-67P-201ENST00000364569 141 ntBASIC0.33□□□□□ -2.36
IRX3P78415 RNU6-1138P-201ENST00000365359 106 ntBASIC0.33□□□□□ -2.36
IRX3P78415 SNORA36.2-201ENST00000384004 127 ntBASIC0.33□□□□□ -2.36
IRX3P78415 RNA5SP63-201ENST00000391225 112 ntBASIC0.33□□□□□ -2.36
IRX3P78415 AL603910.2-201ENST00000407268 136 ntBASIC0.33□□□□□ -2.36
IRX3P78415 MIR1302-11-201ENST00000408051 138 ntBASIC0.33□□□□□ -2.36
IRX3P78415 MIR1302-9-201ENST00000408365 138 ntBASIC0.33□□□□□ -2.36
IRX3P78415 MIR1302-10-201ENST00000408734 138 ntBASIC0.33□□□□□ -2.36
IRX3P78415 Y_RNA.632-201ENST00000459189 102 ntBASIC0.33□□□□□ -2.36
IRX3P78415 RNU7-181P-201ENST00000517234 74 ntBASIC0.33□□□□□ -2.36
IRX3P78415 AC005357.1-201ENST00000588399 301 ntBASIC0.33□□□□□ -2.36
IRX3P78415 MIR1302-2-201ENST00000607096 138 ntBASIC0.33□□□□□ -2.36
IRX3P78415 AC022140.2-201ENST00000623500 188 ntBASIC0.33□□□□□ -2.36
IRX3P78415 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.32□□□□□ -2.36
IRX3P78415 Y_RNA.68-201ENST00000362881 102 ntBASIC0.32□□□□□ -2.36
IRX3P78415 RNA5SP62-201ENST00000363457 110 ntBASIC0.32□□□□□ -2.36
IRX3P78415 Y_RNA.315-201ENST00000365117 102 ntBASIC0.32□□□□□ -2.36
IRX3P78415 RNU6-937P-201ENST00000384325 106 ntBASIC0.32□□□□□ -2.36
IRX3P78415 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.32□□□□□ -2.36
IRX3P78415 MIR18B-201ENST00000454574 71 ntBASIC0.32□□□□□ -2.36
IRX3P78415 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
IRX3P78415 RNU6-1170P-201ENST00000515974 106 ntBASIC0.32□□□□□ -2.36
IRX3P78415 Y_RNA.661-201ENST00000516003 99 ntBASIC0.32□□□□□ -2.36
IRX3P78415 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.32□□□□□ -2.36
IRX3P78415 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.32□□□□□ -2.36
IRX3P78415 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.32□□□□□ -2.36
IRX3P78415 Y_RNA.143-201ENST00000363520 106 ntBASIC0.31□□□□□ -2.36
IRX3P78415 RNU6-1205P-201ENST00000363625 106 ntBASIC0.31□□□□□ -2.36
IRX3P78415 RNY1P8-201ENST00000383970 114 ntBASIC0.31□□□□□ -2.36
IRX3P78415 Y_RNA.496-201ENST00000384444 101 ntBASIC0.31□□□□□ -2.36
IRX3P78415 SNORD72-201ENST00000390994 80 ntBASIC0.31□□□□□ -2.36
IRX3P78415 RNU7-73P-201ENST00000458743 63 ntBASIC0.31□□□□□ -2.36
IRX3P78415 AC012433.1-201ENST00000588916 398 ntBASIC0.31□□□□□ -2.36
IRX3P78415 AC124312.5-201ENST00000604451 268 ntBASIC0.31□□□□□ -2.36
IRX3P78415 Y_RNA.5-201ENST00000362334 102 ntBASIC0.3□□□□□ -2.36
IRX3P78415 Y_RNA.14-201ENST00000362415 103 ntBASIC0.3□□□□□ -2.36
IRX3P78415 SNORA72.1-201ENST00000363485 129 ntBASIC0.3□□□□□ -2.36
IRX3P78415 Y_RNA.263-201ENST00000364659 114 ntBASIC0.3□□□□□ -2.36
IRX3P78415 Y_RNA.547-201ENST00000384654 119 ntBASIC0.3□□□□□ -2.36
IRX3P78415 SNORD38B-201ENST00000384690 67 ntBASIC0.3□□□□□ -2.36
IRX3P78415 MIR520F-201ENST00000384824 87 ntBASIC0.3□□□□□ -2.36
IRX3P78415 RNU6-1009P-201ENST00000390996 107 ntBASIC0.3□□□□□ -2.36
IRX3P78415 SNORA40.5-201ENST00000391061 128 ntBASIC0.3□□□□□ -2.36
IRX3P78415 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.3□□□□□ -2.36
IRX3P78415 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
IRX3P78415 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.3□□□□□ -2.36
IRX3P78415 RNU6-191P-201ENST00000516295 94 ntBASIC0.3□□□□□ -2.36
IRX3P78415 RNU7-53P-201ENST00000516705 60 ntBASIC0.3□□□□□ -2.36
IRX3P78415 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
IRX3P78415 AC040926.1-201ENST00000530195 238 ntBASIC0.3□□□□□ -2.36
IRX3P78415 C8orf59P2-201ENST00000603441 271 ntBASIC0.3□□□□□ -2.36
IRX3P78415 SNORD38B-202ENST00000625943 69 ntBASIC0.3□□□□□ -2.36
IRX3P78415 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
IRX3P78415 RNU6-369P-201ENST00000362515 102 ntBASIC0.29□□□□□ -2.36
IRX3P78415 RNU4-90P-201ENST00000362773 141 ntBASIC0.29□□□□□ -2.36
IRX3P78415 RNU4-80P-201ENST00000363200 141 ntBASIC0.29□□□□□ -2.36
IRX3P78415 Y_RNA.197-201ENST00000364004 102 ntBASIC0.29□□□□□ -2.36
IRX3P78415 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
IRX3P78415 Y_RNA.424-201ENST00000384063 103 ntBASIC0.29□□□□□ -2.36
IRX3P78415 MIR570-201ENST00000384917 97 ntBASIC0.29□□□□□ -2.36
IRX3P78415 MIR520H-201ENST00000385126 88 ntBASIC0.29□□□□□ -2.36
IRX3P78415 RNU4-30P-201ENST00000410245 143 ntBASIC0.29□□□□□ -2.36
IRX3P78415 RNA5SP95-201ENST00000410319 137 ntBASIC0.29□□□□□ -2.36
IRX3P78415 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.29□□□□□ -2.36
IRX3P78415 RNU7-67P-201ENST00000459003 62 ntBASIC0.29□□□□□ -2.36
IRX3P78415 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.29□□□□□ -2.36
IRX3P78415 MIR3145-201ENST00000580727 82 ntBASIC0.29□□□□□ -2.36
IRX3P78415 MIR4804-201ENST00000581683 73 ntBASIC0.29□□□□□ -2.36
IRX3P78415 MIR5093-201ENST00000583199 100 ntBASIC0.29□□□□□ -2.36
IRX3P78415 SNORD58B-201ENST00000607313 66 ntBASIC0.29□□□□□ -2.36
IRX3P78415 AC134878.1-201ENST00000619901 243 ntBASIC0.29□□□□□ -2.36
IRX3P78415 MIR18A-201ENST00000362310 71 ntBASIC0.28□□□□□ -2.36
IRX3P78415 Y_RNA.183-201ENST00000363882 113 ntBASIC0.28□□□□□ -2.36
IRX3P78415 Y_RNA.445-201ENST00000384168 102 ntBASIC0.28□□□□□ -2.36
IRX3P78415 MIR938-201ENST00000401216 83 ntBASIC0.28□□□□□ -2.36
IRX3P78415 MIR548O-201ENST00000408583 114 ntBASIC0.28□□□□□ -2.36
IRX3P78415 HMGN1P33-201ENST00000432945 451 ntBASIC0.28□□□□□ -2.36
IRX3P78415 RNU6-863P-201ENST00000515989 104 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms