Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RAC1P9-201ENST00000604990 392 ntBASIC0.39□□□□□ -2.35
PKNOX1P55347 AL133255.1-201ENST00000606374 441 ntBASIC0.39□□□□□ -2.35
PKNOX1P55347 uc_338.6-201ENST00000613544 171 ntBASIC0.39□□□□□ -2.35
PKNOX1P55347 Y_RNA.445-201ENST00000384168 102 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 BTF3P11-201ENST00000426582 477 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
PKNOX1P55347 Y_RNA.639-201ENST00000458981 102 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 snoU13.16-201ENST00000459350 104 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 Y_RNA.666-201ENST00000516187 112 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 Y_RNA.676-201ENST00000516393 96 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 RNU6-977P-201ENST00000516411 103 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 MIR548S-201ENST00000581352 82 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 AL049861.1-201ENST00000603130 150 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 AC020891.4-201ENST00000605745 93 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 AC013791.1-201ENST00000616619 62 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 MIR6788-201ENST00000618842 66 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
PKNOX1P55347 SNORD115-34-201ENST00000362441 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-12-201ENST00000362583 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-29-201ENST00000362834 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-9-201ENST00000362912 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-21-201ENST00000362963 81 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-14-201ENST00000363090 81 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 Y_RNA.105-201ENST00000363182 111 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-13-201ENST00000363358 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-41-201ENST00000363608 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-11-201ENST00000363616 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-5-201ENST00000363633 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-39-201ENST00000363694 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-4-201ENST00000363810 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 Y_RNA.183-201ENST00000363882 113 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-16-201ENST00000363887 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-6-201ENST00000363942 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-42-201ENST00000364273 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-15-201ENST00000364809 81 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-1-201ENST00000364961 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-26-201ENST00000365067 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-10-201ENST00000365073 81 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 RNU6-1138P-201ENST00000365359 106 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-43-201ENST00000365503 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-36-201ENST00000365629 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 Y_RNA.424-201ENST00000384063 103 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 RNY3P14-201ENST00000384309 102 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 Y_RNA.569-201ENST00000384749 103 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 MIR548J-201ENST00000408833 112 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 RNU6-897P-201ENST00000517135 105 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 MIR4804-201ENST00000581683 73 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 SNORD115-40-201ENST00000606510 82 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 AC134878.1-201ENST00000619901 243 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 MIR6734-201ENST00000621166 68 ntBASIC0.37□□□□□ -2.35
PKNOX1P55347 MIR18A-201ENST00000362310 71 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 RNU4-90P-201ENST00000362773 141 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 Y_RNA.241-201ENST00000364470 117 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 MIR499A-201ENST00000384903 122 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 RNU6-121P-201ENST00000410525 99 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 RNU6-938P-201ENST00000411285 103 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 RNU7-62P-201ENST00000458856 62 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.36□□□□□ -2.35
PKNOX1P55347 MIR3612-201ENST00000579753 87 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 MIR4676-201ENST00000583078 72 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 AC124312.5-201ENST00000604451 268 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 AP000942.4-201ENST00000604811 241 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 AC090574.1-201ENST00000623186 233 ntBASIC0.36□□□□□ -2.35
PKNOX1P55347 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
PKNOX1P55347 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.35□□□□□ -2.35
PKNOX1P55347 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
PKNOX1P55347 MIR369-201ENST00000362155 70 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 Y_RNA.31-201ENST00000362574 102 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 RNU6-1272P-201ENST00000362776 107 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 RNU6-450P-201ENST00000364654 107 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 SNORD42.2-201ENST00000365570 69 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 SNORA63.7-201ENST00000365579 123 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 RNU6-913P-201ENST00000390913 95 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 Y_RNA.581-201ENST00000391017 97 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 RNU6-823P-201ENST00000391042 103 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 RNA5SP496-201ENST00000391240 109 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 AC023449.1-201ENST00000454464 154 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 RNU7-67P-201ENST00000459003 62 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 AC107297.1-201ENST00000459991 176 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 SNORD77.4-201ENST00000516158 81 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.35□□□□□ -2.35
PKNOX1P55347 MIR5000-201ENST00000577717 103 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 MIR4801-201ENST00000582704 82 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.35□□□□□ -2.35
PKNOX1P55347 MIR6740-201ENST00000618268 113 ntBASIC0.35□□□□□ -2.35
PKNOX1P55347 SNORD115-28-201ENST00000363931 81 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 Y_RNA.486-201ENST00000384398 107 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 MIR548A2-201ENST00000384956 97 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 Y_RNA.587-201ENST00000391210 103 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 RNU7-56P-201ENST00000458744 62 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 RNA5SP220-201ENST00000516298 104 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 SNORA18.4-201ENST00000516440 124 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 RNU6-958P-201ENST00000516995 106 ntBASIC0.34□□□□□ -2.36
PKNOX1P55347 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms