Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SNORD115-34-201ENST00000362441 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-12-201ENST00000362583 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-29-201ENST00000362834 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-9-201ENST00000362912 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-21-201ENST00000362963 81 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-14-201ENST00000363090 81 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-13-201ENST00000363358 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-41-201ENST00000363608 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-11-201ENST00000363616 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-5-201ENST00000363633 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-39-201ENST00000363694 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-4-201ENST00000363810 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-16-201ENST00000363887 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-6-201ENST00000363942 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-42-201ENST00000364273 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-15-201ENST00000364809 81 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-1-201ENST00000364961 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-26-201ENST00000365067 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-10-201ENST00000365073 81 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-43-201ENST00000365503 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-36-201ENST00000365629 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 Y_RNA.418-201ENST00000384029 102 ntBASIC0.34□□□□□ -2.36
CASP4P49662 RNA5SP496-201ENST00000391240 109 ntBASIC0.34□□□□□ -2.36
CASP4P49662 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.34□□□□□ -2.36
CASP4P49662 SNORD115-40-201ENST00000606510 82 ntBASIC0.34□□□□□ -2.36
CASP4P49662 AL021707.8-201ENST00000609428 183 ntBASIC0.34□□□□□ -2.36
CASP4P49662 AC134878.1-201ENST00000619901 243 ntBASIC0.34□□□□□ -2.36
CASP4P49662 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
CASP4P49662 MIR18A-201ENST00000362310 71 ntBASIC0.33□□□□□ -2.36
CASP4P49662 Y_RNA.112-201ENST00000363250 102 ntBASIC0.33□□□□□ -2.36
CASP4P49662 SNORD113-8-201ENST00000363497 74 ntBASIC0.33□□□□□ -2.36
CASP4P49662 RNY1-201ENST00000364228 113 ntBASIC0.33□□□□□ -2.36
CASP4P49662 Y_RNA.241-201ENST00000364470 117 ntBASIC0.33□□□□□ -2.36
CASP4P49662 Y_RNA.813-201ENST00000364639 102 ntBASIC0.33□□□□□ -2.36
CASP4P49662 Y_RNA.315-201ENST00000365117 102 ntBASIC0.33□□□□□ -2.36
CASP4P49662 RNU6-1138P-201ENST00000365359 106 ntBASIC0.33□□□□□ -2.36
CASP4P49662 Y_RNA.356-201ENST00000365475 113 ntBASIC0.33□□□□□ -2.36
CASP4P49662 SNORA63.7-201ENST00000365579 123 ntBASIC0.33□□□□□ -2.36
CASP4P49662 RNU6-763P-201ENST00000390865 106 ntBASIC0.33□□□□□ -2.36
CASP4P49662 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
CASP4P49662 RNU7-62P-201ENST00000458856 62 ntBASIC0.33□□□□□ -2.36
CASP4P49662 RNU6-764P-201ENST00000516396 105 ntBASIC0.33□□□□□ -2.36
CASP4P49662 RNU7-149P-201ENST00000516739 59 ntBASIC0.33□□□□□ -2.36
CASP4P49662 MIR4804-201ENST00000581683 73 ntBASIC0.33□□□□□ -2.36
CASP4P49662 C8orf59P2-201ENST00000603441 271 ntBASIC0.33□□□□□ -2.36
CASP4P49662 MIR376A1-201ENST00000616574 68 ntBASIC0.33□□□□□ -2.36
CASP4P49662 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
CASP4P49662 Y_RNA.197-201ENST00000364004 102 ntBASIC0.32□□□□□ -2.36
CASP4P49662 AC087499.4-201ENST00000448505 178 ntBASIC0.32□□□□□ -2.36
CASP4P49662 RNU7-67P-201ENST00000459003 62 ntBASIC0.32□□□□□ -2.36
CASP4P49662 snoU13.18-201ENST00000459483 104 ntBASIC0.32□□□□□ -2.36
CASP4P49662 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
CASP4P49662 MIR4676-201ENST00000583078 72 ntBASIC0.32□□□□□ -2.36
CASP4P49662 LARP7P1-201ENST00000605576 316 ntBASIC0.32□□□□□ -2.36
CASP4P49662 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.32□□□□□ -2.36
CASP4P49662 PVT1_3.1-201ENST00000620853 95 ntBASIC0.32□□□□□ -2.36
CASP4P49662 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CASP4P49662 Y_RNA.14-201ENST00000362415 103 ntBASIC0.31□□□□□ -2.36
CASP4P49662 RNU4-90P-201ENST00000362773 141 ntBASIC0.31□□□□□ -2.36
CASP4P49662 Y_RNA.303-201ENST00000364998 94 ntBASIC0.31□□□□□ -2.36
CASP4P49662 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
CASP4P49662 Y_RNA.424-201ENST00000384063 103 ntBASIC0.31□□□□□ -2.36
CASP4P49662 Y_RNA.445-201ENST00000384168 102 ntBASIC0.31□□□□□ -2.36
CASP4P49662 AC090844.1-201ENST00000422019 156 ntBASIC0.31□□□□□ -2.36
CASP4P49662 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
CASP4P49662 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.31□□□□□ -2.36
CASP4P49662 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.31□□□□□ -2.36
CASP4P49662 AC091959.1-201ENST00000495857 238 ntBASIC0.31□□□□□ -2.36
CASP4P49662 AC082651.2-201ENST00000496833 166 ntBASIC0.31□□□□□ -2.36
CASP4P49662 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
CASP4P49662 SNORA18.4-201ENST00000516440 124 ntBASIC0.31□□□□□ -2.36
CASP4P49662 RNU6-1046P-201ENST00000516538 107 ntBASIC0.31□□□□□ -2.36
CASP4P49662 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.31□□□□□ -2.36
CASP4P49662 MIR4662B-201ENST00000579498 81 ntBASIC0.31□□□□□ -2.36
CASP4P49662 AP000942.4-201ENST00000604811 241 ntBASIC0.31□□□□□ -2.36
CASP4P49662 AC013791.1-201ENST00000616619 62 ntBASIC0.31□□□□□ -2.36
CASP4P49662 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
CASP4P49662 MIR367-201ENST00000362299 68 ntBASIC0.3□□□□□ -2.36
CASP4P49662 SNORD115-28-201ENST00000363931 81 ntBASIC0.3□□□□□ -2.36
CASP4P49662 MIR598-201ENST00000384868 97 ntBASIC0.3□□□□□ -2.36
CASP4P49662 Y_RNA.579-201ENST00000390939 94 ntBASIC0.3□□□□□ -2.36
CASP4P49662 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.3□□□□□ -2.36
CASP4P49662 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.3□□□□□ -2.36
CASP4P49662 MTND4LP30-201ENST00000454092 297 ntBASIC0.3□□□□□ -2.36
CASP4P49662 HSPE1P25-201ENST00000455484 251 ntBASIC0.3□□□□□ -2.36
CASP4P49662 RNU7-73P-201ENST00000458743 63 ntBASIC0.3□□□□□ -2.36
CASP4P49662 AC007485.1-201ENST00000616755 206 ntBASIC0.3□□□□□ -2.36
CASP4P49662 AC090574.1-201ENST00000623186 233 ntBASIC0.3□□□□□ -2.36
CASP4P49662 Y_RNA.58-201ENST00000362807 102 ntBASIC0.29□□□□□ -2.36
CASP4P49662 Y_RNA.154-201ENST00000363624 102 ntBASIC0.29□□□□□ -2.36
CASP4P49662 Y_RNA.183-201ENST00000363882 113 ntBASIC0.29□□□□□ -2.36
CASP4P49662 RNY3P1-201ENST00000365085 102 ntBASIC0.29□□□□□ -2.36
CASP4P49662 RNU6-102P-201ENST00000384485 104 ntBASIC0.29□□□□□ -2.36
CASP4P49662 SNORD38B-201ENST00000384690 67 ntBASIC0.29□□□□□ -2.36
CASP4P49662 Y_RNA.569-201ENST00000384749 103 ntBASIC0.29□□□□□ -2.36
CASP4P49662 MIR489-201ENST00000384923 84 ntBASIC0.29□□□□□ -2.36
CASP4P49662 Y_RNA.602-201ENST00000410535 92 ntBASIC0.29□□□□□ -2.36
CASP4P49662 RNU2-70P-201ENST00000410718 179 ntBASIC0.29□□□□□ -2.36
CASP4P49662 RNU6-383P-201ENST00000410864 94 ntBASIC0.29□□□□□ -2.36
CASP4P49662 AC015818.7-201ENST00000428754 109 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms