Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MTND1P7-201ENST00000632801 297 ntBASIC0.48□□□□□ -2.33
TNFSF9P41273 MIR4251-201ENST00000635819 61 ntBASIC0.48□□□□□ -2.33
TNFSF9P41273 MIR924-201ENST00000638017 53 ntBASIC0.48□□□□□ -2.33
TNFSF9P41273 RNU6-662P-201ENST00000384253 104 ntBASIC0.47□□□□□ -2.33
TNFSF9P41273 RNU6-125P-201ENST00000384505 107 ntBASIC0.47□□□□□ -2.33
TNFSF9P41273 SNORD115-46-201ENST00000390982 71 ntBASIC0.47□□□□□ -2.33
TNFSF9P41273 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.47□□□□□ -2.33
TNFSF9P41273 AL358176.2-201ENST00000425769 204 ntBASIC0.47□□□□□ -2.33
TNFSF9P41273 AC236972.2-201ENST00000434979 310 ntBASIC0.47□□□□□ -2.33
TNFSF9P41273 POLR2KP2-201ENST00000438155 177 ntBASIC0.47□□□□□ -2.33
TNFSF9P41273 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
TNFSF9P41273 RNU7-25P-201ENST00000516544 62 ntBASIC0.47□□□□□ -2.33
TNFSF9P41273 AC022616.4-201ENST00000522985 181 ntBASIC0.47□□□□□ -2.33
TNFSF9P41273 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.47□□□□□ -2.33
TNFSF9P41273 AC015726.2-201ENST00000620112 122 ntBASIC0.47□□□□□ -2.33
TNFSF9P41273 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.47□□□□□ -2.33
TNFSF9P41273 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TNFSF9P41273 Y_RNA.64-201ENST00000362845 102 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 SNORD14E-201ENST00000364009 85 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 Y_RNA.214-201ENST00000364201 112 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 Y_RNA.258-201ENST00000364613 105 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 SNORA22B-201ENST00000383876 138 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 Y_RNA.527-201ENST00000384573 102 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 RNU6-205P-201ENST00000390858 107 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 RNU6-710P-201ENST00000410424 105 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 Y_RNA.666-201ENST00000516187 112 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 RNU7-43P-201ENST00000516554 64 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 RNA5SP330-201ENST00000517096 96 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 AL049861.1-201ENST00000603130 150 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 MIR4791-201ENST00000607666 84 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 Pinc.1-201ENST00000616452 154 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 MIR376A1-201ENST00000616574 68 ntBASIC0.46□□□□□ -2.34
TNFSF9P41273 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
TNFSF9P41273 Y_RNA.115-201ENST00000363272 98 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 Y_RNA.424-201ENST00000384063 103 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 Y_RNA.445-201ENST00000384168 102 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 SNORA2B-201ENST00000384583 137 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 Y_RNA.547-201ENST00000384654 119 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 RNU6-994P-201ENST00000410507 111 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 RNU6-651P-201ENST00000411040 105 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 RNU6-938P-201ENST00000411285 103 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 RNU7-116P-201ENST00000516940 62 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.45□□□□□ -2.34
TNFSF9P41273 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.45□□□□□ -2.34
TNFSF9P41273 AC011195.1-201ENST00000578177 177 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 Z83818.1-201ENST00000603584 150 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 AL008718.3-201ENST00000610217 321 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 JPX_2.1-201ENST00000614161 69 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 AC022140.2-201ENST00000623500 188 ntBASIC0.45□□□□□ -2.34
TNFSF9P41273 Y_RNA.30-201ENST00000362572 97 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 RNU6-674P-201ENST00000363831 107 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 SNORD83.1-201ENST00000411362 77 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 AC244098.3-201ENST00000424803 96 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 SEPT14P8-201ENST00000508026 178 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 RNU2-13P-201ENST00000515909 113 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 RNU6-1110P-201ENST00000516462 101 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 AC018659.1-201ENST00000551083 169 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 SNORD113-5-201ENST00000607261 78 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 AL021707.8-201ENST00000609428 183 ntBASIC0.44□□□□□ -2.34
TNFSF9P41273 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
TNFSF9P41273 Y_RNA.153-201ENST00000363615 91 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 Y_RNA.380-201ENST00000365663 111 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 RNU6-442P-201ENST00000383968 104 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 Y_RNA.486-201ENST00000384398 107 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 Y_RNA.512-201ENST00000384518 102 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 MIR548A2-201ENST00000384956 97 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 RNU6-913P-201ENST00000390913 95 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 RNU1-119P-201ENST00000391122 165 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 RNU6-1190P-201ENST00000410811 104 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 RNA5SP222-201ENST00000411039 105 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 BTF3P11-201ENST00000426582 477 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 HMGN1P33-201ENST00000432945 451 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 HMGN2P32-201ENST00000444648 269 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 AC091959.1-201ENST00000495857 238 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 RNU6-830P-201ENST00000516353 107 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 RNU7-149P-201ENST00000516739 59 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 RNU6-1153P-201ENST00000516760 105 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.43□□□□□ -2.34
TNFSF9P41273 AL136317.1-201ENST00000612653 226 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 AC006441.5-201ENST00000612680 209 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 MIR8087-201ENST00000612745 78 ntBASIC0.43□□□□□ -2.34
TNFSF9P41273 Y_RNA.28-201ENST00000362554 111 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 Y_RNA.117-201ENST00000363294 101 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 Y_RNA.136-201ENST00000363444 102 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 Y_RNA.183-201ENST00000363882 113 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 SNORD113.3-201ENST00000364630 78 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 Y_RNA.370-201ENST00000365589 108 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 Y_RNA.389-201ENST00000383924 113 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 Y_RNA.569-201ENST00000384749 103 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 RNU2-70P-201ENST00000410718 179 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 RNU6-1170P-201ENST00000515974 106 ntBASIC0.42□□□□□ -2.34
TNFSF9P41273 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.42□□□□□ -2.34
TNFSF9P41273 AC020661.2-201ENST00000560114 134 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms