Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC138869.1-201ENST00000568623 124 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 MIR4639-201ENST00000584938 69 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 AC022441.3-201ENST00000605737 136 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 AC024614.3-201ENST00000637860 256 ntBASIC-0.45□□□□□ -2.48
HLA-DMBP28068 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 RNU6-626P-201ENST00000363354 107 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 RNU4-50P-201ENST00000364361 141 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 SNORA1.1-201ENST00000364671 133 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 RNU6-926P-201ENST00000384075 107 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 MIR106A-201ENST00000384870 81 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 RNU2-66P-201ENST00000410650 161 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 Z95118.1-201ENST00000421372 247 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 AF228730.4-201ENST00000421457 183 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 MTCO1P5-201ENST00000433573 344 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 MTND5P5-201ENST00000503764 376 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 AC092447.9-201ENST00000603395 144 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 MIR548AY-201ENST00000617669 107 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.46□□□□□ -2.48
HLA-DMBP28068 RNA5SP275-201ENST00000363936 118 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 RNU6-593P-201ENST00000364716 112 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 SNORD93-201ENST00000408813 74 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 MTND4LP11-201ENST00000422184 280 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 AL138752.1-201ENST00000452964 351 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 AC091951.2-201ENST00000500762 203 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 RNU7-53P-201ENST00000516705 60 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 AC087588.2-201ENST00000617667 426 ntBASIC-0.47□□□□□ -2.48
HLA-DMBP28068 SNORD114-12-201ENST00000365400 75 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 RNU6-46P-201ENST00000383860 107 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 SNORD12C-201ENST00000386307 89 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 AL590004.1-201ENST00000405321 300 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 MIR548O-201ENST00000408583 114 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 MIR1278-201ENST00000408753 81 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 RNA5SP118-201ENST00000410385 109 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 AC096531.1-201ENST00000419107 107 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 AC087499.4-201ENST00000448505 178 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 RNU6-437P-201ENST00000459408 95 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 RNU6-470P-201ENST00000515954 104 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 RNA5SP476-201ENST00000516613 103 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 RNU6-180P-201ENST00000516697 61 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 MIR4790-201ENST00000577799 79 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 MIR4752-201ENST00000579672 72 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 AC124312.5-201ENST00000604451 268 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 MIR1244-1-201ENST00000612829 85 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.48□□□□□ -2.49
HLA-DMBP28068 MIR6082-201ENST00000613604 109 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 AC092794.2-201ENST00000620933 563 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 MIR1244-3-201ENST00000635744 85 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 MIR1244-2-201ENST00000636449 85 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 MIR1244-4-202ENST00000636813 85 ntBASIC-0.48□□□□□ -2.49
HLA-DMBP28068 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 RNY3P4-201ENST00000384428 101 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 MIR215-201ENST00000384858 110 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 SNORA40.5-201ENST00000391061 128 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 RNA5SP163-201ENST00000410304 99 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 RNA5SP451-201ENST00000410588 110 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 AC098826.2-201ENST00000452011 651 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 MIR2053-201ENST00000459295 91 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 RNU6-765P-201ENST00000516916 99 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 MIR548AD-201ENST00000584780 82 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 AL080274.1-201ENST00000605565 220 ntBASIC-0.49□□□□□ -2.49
HLA-DMBP28068 RNA5SP368-201ENST00000364298 116 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 MIR501-201ENST00000390204 84 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.5□□□□□ -2.49
HLA-DMBP28068 MTND1P2-201ENST00000430604 821 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 RPL30P15-201ENST00000457129 321 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.5□□□□□ -2.49
HLA-DMBP28068 RN7SKP295-201ENST00000517264 153 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 AC006600.1-201ENST00000572529 153 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 AC005899.2-201ENST00000584353 90 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 AC108676.2-201ENST00000605225 163 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 Z99129.1-201ENST00000612510 255 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 AC244669.1-204ENST00000621564 178 ntBASIC-0.5□□□□□ -2.49
HLA-DMBP28068 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 SNORD116-9-201ENST00000384000 95 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 SNORD116-3-201ENST00000384287 95 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 SNORD116-8-201ENST00000384365 95 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 SNORD116-7-201ENST00000384404 95 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 SNORD116-5-201ENST00000384462 95 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 RNU6-938P-201ENST00000411285 103 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 AC009161.1-201ENST00000417306 376 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 MIR3611-201ENST00000584484 83 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.51□□□□□ -2.49
HLA-DMBP28068 AL670379.3-201ENST00000605040 251 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 AC022140.2-201ENST00000623500 188 ntBASIC-0.51□□□□□ -2.49
HLA-DMBP28068 SNORD14C-201ENST00000365382 88 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 SNORA27-201ENST00000384323 126 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms