Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RNU6-911P-201ENST00000516523 104 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 RNU7-25P-201ENST00000516544 62 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 RNA5SP268-201ENST00000516828 124 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 MIR8055-201ENST00000610739 97 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 AC022306.2-201ENST00000617563 647 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 AL669831.3-213ENST00000636676 183 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 MIR3688-2-201ENST00000636963 87 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 RNU4-50P-201ENST00000364361 141 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 MIR145-201ENST00000384967 88 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 MIR329-2-201ENST00000385029 84 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 MIR643-201ENST00000385267 97 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 MT-TF-201ENST00000387314 71 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 AC069271.1-201ENST00000445577 156 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 RNU6-264P-201ENST00000517134 104 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 DEFB117-201ENST00000602356 141 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 AP000942.4-201ENST00000604811 241 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 AC067863.3-201ENST00000624172 122 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 TPTEP1-208ENST00000636884 213 ntBASIC-0.17□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 MIR593-201ENST00000384856 100 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 MIR610-201ENST00000385139 96 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 RNU6-127P-201ENST00000390897 107 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 SNORA26.5-201ENST00000391215 123 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 MIR548O-201ENST00000408583 114 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 MIR1278-201ENST00000408753 81 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 SNORA36B-201ENST00000410438 131 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 RNU6-848P-201ENST00000515948 107 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 RNU6-617P-201ENST00000516147 107 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 RNU6-473P-201ENST00000516164 107 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 RNA5SP285-201ENST00000516619 119 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 U6.92-201ENST00000636464 89 ntBASIC-0.18□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 RNU4-24P-201ENST00000364565 139 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 RNU6-913P-201ENST00000390913 95 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 AL512326.2-201ENST00000426359 151 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 AC087499.4-201ENST00000448505 178 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 RNU6-120P-201ENST00000516077 103 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 RNU6-469P-201ENST00000516253 101 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 U2.1-201ENST00000618978 145 ntBASIC-0.19□□□□□ -2.44
RBFOX3A6NFN3 MIR30D-201ENST00000362283 70 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 SNORD81.1-201ENST00000363064 77 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 RNU6-929P-201ENST00000384429 107 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 MIR548H2-201ENST00000408874 88 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 RNU7-129P-201ENST00000516128 62 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 RNU6-958P-201ENST00000516995 106 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 MIR4743-201ENST00000584576 69 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 AC005357.1-201ENST00000588399 301 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 MIR7107-201ENST00000611489 80 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 MIR6828-201ENST00000636181 60 ntBASIC-0.2□□□□□ -2.44
RBFOX3A6NFN3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 RNU6-756P-201ENST00000383997 107 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 RNU6-187P-201ENST00000384139 106 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 MIR628-201ENST00000385229 95 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 RNU6-602P-201ENST00000411155 105 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 FCF1P9-201ENST00000412546 282 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 PDCL2P1-201ENST00000419302 352 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 MTCO1P5-201ENST00000433573 344 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 RNU7-141P-201ENST00000459304 62 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 RNU7-169P-201ENST00000459456 61 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 RNU7-53P-201ENST00000516705 60 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 AC048344.4-201ENST00000619744 527 ntBASIC-0.21□□□□□ -2.44
RBFOX3A6NFN3 SNORA2A-201ENST00000383885 135 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 RNU6-514P-201ENST00000384208 107 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 SNORD116-2-201ENST00000384274 95 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 SNORD116-6-201ENST00000384711 96 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 MIR644A-201ENST00000385262 94 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 SNORA40.5-201ENST00000391061 128 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 AC124312.5-201ENST00000604451 268 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 AC010205.1-201ENST00000616668 449 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 AC022140.2-201ENST00000623500 188 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 AC138305.3-201ENST00000624988 240 ntBASIC-0.22□□□□□ -2.44
RBFOX3A6NFN3 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.23□□□□□ -2.45
RBFOX3A6NFN3 RNY3P11-201ENST00000364153 102 ntBASIC-0.23□□□□□ -2.45
RBFOX3A6NFN3 SNORA1.1-201ENST00000364671 133 ntBASIC-0.23□□□□□ -2.45
RBFOX3A6NFN3 SNORA72.4-201ENST00000384174 132 ntBASIC-0.23□□□□□ -2.45
RBFOX3A6NFN3 RNU6-135P-201ENST00000516769 101 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms