Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 uc_338.4-201ENST00000616635 176 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 Y_RNA.789-201ENST00000622480 102 ntBASIC1.41□□□□□ -2.18
HCN3Q9P1Z3 SNORD27-201ENST00000363981 72 ntBASIC1.4□□□□□ -2.19
HCN3Q9P1Z3 RNU6-574P-201ENST00000384265 107 ntBASIC1.4□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.4□□□□□ -2.19
HCN3Q9P1Z3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.4□□□□□ -2.19
HCN3Q9P1Z3 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
HCN3Q9P1Z3 RNU6-165P-201ENST00000517170 99 ntBASIC1.4□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 MIR15B-201ENST00000385045 98 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 SNORD2.1-201ENST00000458762 69 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 SNORD111.1-201ENST00000516421 86 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 RNU7-149P-201ENST00000516739 59 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 MIR4643-201ENST00000577473 78 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 MIR4503-201ENST00000582187 83 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 AL162730.1-201ENST00000605734 292 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 Pinc.1-201ENST00000616452 154 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.39□□□□□ -2.19
HCN3Q9P1Z3 RNU6-268P-201ENST00000364174 107 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 RNU6-702P-201ENST00000364982 107 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 MIR626-201ENST00000385032 94 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 SNORA74.3-201ENST00000517108 154 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 BX284668.6-201ENST00000606899 438 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 AC062037.2-201ENST00000610137 73 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 AC015726.2-201ENST00000620112 122 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 AL365265.1-201ENST00000621045 234 ntBASIC1.38□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.37□□□□□ -2.19
HCN3Q9P1Z3 MIR520C-201ENST00000385005 87 ntBASIC1.37□□□□□ -2.19
HCN3Q9P1Z3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.37□□□□□ -2.19
HCN3Q9P1Z3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.37□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.668-201ENST00000516233 93 ntBASIC1.37□□□□□ -2.19
HCN3Q9P1Z3 AC100767.1-201ENST00000528178 123 ntBASIC1.37□□□□□ -2.19
HCN3Q9P1Z3 MIR5688-201ENST00000580619 83 ntBASIC1.37□□□□□ -2.19
HCN3Q9P1Z3 AL021707.8-201ENST00000609428 183 ntBASIC1.37□□□□□ -2.19
HCN3Q9P1Z3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.37□□□□□ -2.19
HCN3Q9P1Z3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.65-201ENST00000362846 100 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.350-201ENST00000365409 98 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 MIR1276-201ENST00000408707 83 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 AC245047.8-201ENST00000456455 284 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 SNORD123-201ENST00000459473 70 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 SNORD116-28-201ENST00000516123 91 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 MIR4282-201ENST00000583613 67 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 SNORA4-201ENST00000584302 138 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 MIR3149-201ENST00000584629 83 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 ZNF209P-201ENST00000593450 2304 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 MIR6504-201ENST00000613520 61 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 7SK.10-201ENST00000621414 298 ntBASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.36□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.76-201ENST00000362931 109 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.144-201ENST00000363521 113 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 SNORD26-201ENST00000384147 75 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 SNRPGP14-201ENST00000435400 219 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 AC048334.1-201ENST00000477975 159 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 RN7SKP164-201ENST00000516138 266 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 AL096861.1-201ENST00000610899 123 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 AL442067.1-201ENST00000613261 223 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HCN3Q9P1Z3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 RNA5SP327-201ENST00000362494 101 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.292-201ENST00000364904 97 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.304-201ENST00000365011 112 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.452-201ENST00000384202 108 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 RNU6-463P-201ENST00000384340 107 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 MIR7-2-201ENST00000384970 110 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 MIR4764-201ENST00000580680 88 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 MIR3128-201ENST00000581957 66 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 AC006441.5-201ENST00000612680 209 ntBASIC1.34□□□□□ -2.19
HCN3Q9P1Z3 Y_RNA.262-201ENST00000364641 102 ntBASIC1.33□□□□□ -2.2
HCN3Q9P1Z3 RNU6-392P-201ENST00000364926 101 ntBASIC1.33□□□□□ -2.2
HCN3Q9P1Z3 MT-TT-201ENST00000387460 66 ntBASIC1.33□□□□□ -2.2
HCN3Q9P1Z3 SNORD77.4-201ENST00000516158 81 ntBASIC1.33□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.33□□□□□ -2.2
HCN3Q9P1Z3 MIR4662B-201ENST00000579498 81 ntBASIC1.33□□□□□ -2.2
HCN3Q9P1Z3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HCN3Q9P1Z3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms