Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 HMGN2P32-201ENST00000444648 269 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 SNORD11-201ENST00000459124 84 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 AL442663.2-201ENST00000554385 511 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 AL117187.1-201ENST00000555482 181 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 MIR5692C2-201ENST00000577959 77 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 MIR6734-201ENST00000621166 68 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 AC099654.10-201ENST00000640395 161 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.396-201ENST00000383949 103 ntBASIC1.33□□□□□ -2.2
SMC4Q9NTJ3 MIR19B1-201ENST00000384829 87 ntBASIC1.33□□□□□ -2.2
SMC4Q9NTJ3 MIR568-201ENST00000385036 95 ntBASIC1.33□□□□□ -2.2
SMC4Q9NTJ3 AL603910.2-201ENST00000407268 136 ntBASIC1.33□□□□□ -2.2
SMC4Q9NTJ3 AL358176.2-201ENST00000425769 204 ntBASIC1.33□□□□□ -2.2
SMC4Q9NTJ3 COX6CP14-201ENST00000469580 174 ntBASIC1.33□□□□□ -2.2
SMC4Q9NTJ3 AC048334.1-201ENST00000477975 159 ntBASIC1.33□□□□□ -2.2
SMC4Q9NTJ3 AC007742.2-201ENST00000618226 398 ntBASIC1.33□□□□□ -2.2
SMC4Q9NTJ3 RNU6-1205P-201ENST00000363625 106 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 RNU6-740P-201ENST00000364734 105 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 RNU6-514P-201ENST00000384208 107 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 RNU6-1289P-201ENST00000384431 106 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 MRPL35P3-201ENST00000421557 364 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 MTND2P23-201ENST00000422990 651 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 SNRPGP14-201ENST00000435400 219 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 RNU7-40P-201ENST00000516397 64 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 SNORD111.1-201ENST00000516421 86 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 MIR3192-201ENST00000584920 77 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 AC087685.1-201ENST00000587507 141 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 AL096861.1-201ENST00000610899 123 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 JPX_2.1-201ENST00000614161 69 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 RMST_2.1-201ENST00000617263 136 ntBASIC1.32□□□□□ -2.2
SMC4Q9NTJ3 UBE2WP1-201ENST00000362030 340 ntBASIC1.31□□□□□ -2.2
SMC4Q9NTJ3 Y_RNA.47-201ENST00000362697 108 ntBASIC1.31□□□□□ -2.2
SMC4Q9NTJ3 RNU6-1309P-201ENST00000363305 108 ntBASIC1.31□□□□□ -2.2
SMC4Q9NTJ3 RNU6-211P-201ENST00000384047 107 ntBASIC1.31□□□□□ -2.2
SMC4Q9NTJ3 RNU6-910P-201ENST00000390844 107 ntBASIC1.31□□□□□ -2.2
SMC4Q9NTJ3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.31□□□□□ -2.2
SMC4Q9NTJ3 RNU6-327P-201ENST00000516270 127 ntBASIC1.31□□□□□ -2.2
SMC4Q9NTJ3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.31□□□□□ -2.2
SMC4Q9NTJ3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.31□□□□□ -2.2
SMC4Q9NTJ3 Y_RNA.275-201ENST00000364726 110 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 Y_RNA.461-201ENST00000384263 103 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 RNU6-713P-201ENST00000384761 107 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 MIR136-201ENST00000385207 82 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 MIR4643-201ENST00000577473 78 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 AC008507.4-201ENST00000585464 127 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 AC037487.3-201ENST00000606668 112 ntBASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SMC4Q9NTJ3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 MIR96-201ENST00000362288 78 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 RNU6-268P-201ENST00000364174 107 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 RNU4-38P-201ENST00000364472 129 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 SNORA22-201ENST00000383907 134 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 SNORA22C-201ENST00000384614 134 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 AL078595.1-201ENST00000404458 226 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 RPS29P28-201ENST00000446439 141 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 AC245047.8-201ENST00000456455 284 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 SNORA18.7-201ENST00000516910 131 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 AL391516.1-201ENST00000554380 2449 ntBASIC1.29□□□□□ -2.2
SMC4Q9NTJ3 Y_RNA.133-201ENST00000363428 110 ntBASIC1.28□□□□□ -2.2
SMC4Q9NTJ3 RNU6-144P-201ENST00000383951 107 ntBASIC1.28□□□□□ -2.2
SMC4Q9NTJ3 MIR1302-6-201ENST00000408466 90 ntBASIC1.28□□□□□ -2.2
SMC4Q9NTJ3 SNORA74.3-201ENST00000517108 154 ntBASIC1.28□□□□□ -2.2
SMC4Q9NTJ3 AL049861.1-201ENST00000603130 150 ntBASIC1.28□□□□□ -2.2
SMC4Q9NTJ3 AL021707.8-201ENST00000609428 183 ntBASIC1.28□□□□□ -2.2
SMC4Q9NTJ3 AL391903.3-201ENST00000612158 163 ntBASIC1.28□□□□□ -2.2
SMC4Q9NTJ3 Y_RNA.44-201ENST00000362676 108 ntBASIC1.27□□□□□ -2.21
SMC4Q9NTJ3 Y_RNA.176-201ENST00000363815 109 ntBASIC1.27□□□□□ -2.21
SMC4Q9NTJ3 SNORD14E-201ENST00000364009 85 ntBASIC1.27□□□□□ -2.21
SMC4Q9NTJ3 SNORA80D-201ENST00000384488 135 ntBASIC1.27□□□□□ -2.21
SMC4Q9NTJ3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.27□□□□□ -2.21
SMC4Q9NTJ3 MTND4LP30-201ENST00000454092 297 ntBASIC1.27□□□□□ -2.21
SMC4Q9NTJ3 MIR2681-201ENST00000581814 105 ntBASIC1.27□□□□□ -2.21
SMC4Q9NTJ3 AC012433.1-201ENST00000588916 398 ntBASIC1.27□□□□□ -2.21
SMC4Q9NTJ3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.27□□□□□ -2.21
SMC4Q9NTJ3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.26□□□□□ -2.21
SMC4Q9NTJ3 Y_RNA.162-201ENST00000363683 102 ntBASIC1.26□□□□□ -2.21
SMC4Q9NTJ3 SNORD28B-201ENST00000390993 75 ntBASIC1.26□□□□□ -2.21
SMC4Q9NTJ3 AC063976.4-201ENST00000421971 163 ntBASIC1.26□□□□□ -2.21
SMC4Q9NTJ3 OR2A41P-201ENST00000473586 105 ntBASIC1.26□□□□□ -2.21
SMC4Q9NTJ3 RNU7-41P-201ENST00000515917 61 ntBASIC1.26□□□□□ -2.21
SMC4Q9NTJ3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.26□□□□□ -2.21
SMC4Q9NTJ3 HSPE1P19-201ENST00000603327 295 ntBASIC1.26□□□□□ -2.21
SMC4Q9NTJ3 AL353621.2-201ENST00000605340 133 ntBASIC1.26□□□□□ -2.21
SMC4Q9NTJ3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 MIR335-201ENST00000362173 94 ntBASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 RNY1-201ENST00000364228 113 ntBASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 RNU1-93P-201ENST00000364704 169 ntBASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 RNU2-38P-201ENST00000410856 79 ntBASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 SNORD123-201ENST00000459473 70 ntBASIC1.25□□□□□ -2.21
SMC4Q9NTJ3 RPS26P48-201ENST00000491713 339 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms