Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MIR6864-201ENST00000617935 70 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR8057-201ENST00000620957 69 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 AC006386.2-201ENST00000624491 75 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 AC012005.1-201ENST00000624575 75 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 AF117829.1-206ENST00000621883 3802 ntBASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
KRTAP4-3Q9BYR4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 PWAR6-201ENST00000552334 4618 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR30E-201ENST00000362104 92 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 Y_RNA.40-201ENST00000362645 93 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORA80E-201ENST00000384744 137 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR548C-201ENST00000384815 97 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORA12-201ENST00000391162 147 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 AC019129.1-201ENST00000403786 261 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 AL606490.4-201ENST00000423117 127 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 AC025033.1-201ENST00000463883 194 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU7-174P-201ENST00000516248 59 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 RNA5SP341-201ENST00000516261 117 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU1-103P-201ENST00000516502 125 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 AL358944.1-201ENST00000528537 144 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR4738-201ENST00000579134 87 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 UBL5P2-201ENST00000583788 219 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR6509-201ENST00000614603 85 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 AC007318.2-201ENST00000620999 243 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 ZNF658B-202ENST00000615961 3375 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 SCN1A-220ENST00000641603 12506 ntBASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
KRTAP4-3Q9BYR4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AL356274.2-201ENST00000624379 3752 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AC007496.3-201ENST00000624987 3443 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-664P-201ENST00000362381 107 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORD68-201ENST00000363214 84 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RNA5SP322-201ENST00000363617 119 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORA25.6-201ENST00000364121 118 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORA38.1-201ENST00000364172 131 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORA68.1-201ENST00000364537 132 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-1126P-201ENST00000384002 107 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORD101-201ENST00000384027 73 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORD116-16-201ENST00000384533 92 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR203A-201ENST00000384836 110 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR451A-201ENST00000385059 72 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR517B-201ENST00000385102 67 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-913P-201ENST00000390913 95 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AL138878.1-201ENST00000405131 347 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR1267-201ENST00000408723 78 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR1290-201ENST00000408735 78 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORD75.2-201ENST00000408784 58 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RNA5SP104-201ENST00000410989 118 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AL034379.1-201ENST00000423216 253 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RPS29P31-201ENST00000446147 164 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU7-73P-201ENST00000458743 63 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 snoU13.14-201ENST00000459372 104 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RN7SL594P-201ENST00000470590 287 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AC021146.9-201ENST00000512503 156 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 SNORD45.4-201ENST00000516629 73 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU11-2P-201ENST00000516898 142 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 RNU6-341P-201ENST00000516973 96 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AL360157.1-201ENST00000565962 87 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 MIR4696-201ENST00000581431 70 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AP003355.3-201ENST00000623465 114 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 U2.21-201ENST00000637295 81 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AC000403.1-201ENST00000613696 3585 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AC118273.1-201ENST00000525324 3006 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 AC007336.1-201ENST00000576365 3828 ntBASIC1.12□□□□□ -2.23
KRTAP4-3Q9BYR4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-3Q9BYR4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-3Q9BYR4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
KRTAP4-3Q9BYR4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms