Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 Y_RNA.202-201ENST00000364083 110 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 SNORA24-201ENST00000384096 131 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 MIR608-201ENST00000384820 100 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 MT-TN-201ENST00000387400 73 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 MIR942-201ENST00000401111 86 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 SNORD111-201ENST00000408139 94 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 AL731563.1-201ENST00000442202 214 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 AC023449.1-201ENST00000454464 154 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 U7.7-201ENST00000459276 60 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 AC091959.1-201ENST00000495857 238 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 RNU6-126P-201ENST00000516685 103 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 AC036111.3-201ENST00000526389 112 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 AC109810.1-201ENST00000534066 224 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 MIR4662B-201ENST00000579498 81 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 AC037487.3-201ENST00000606668 112 ntBASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.64□□□□□ -2.31
RPUSD4Q96CM3 AC068700.1-201ENST00000565862 3754 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 MIR377-201ENST00000362145 69 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 SNORA25.1-201ENST00000362326 128 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 Y_RNA.153-201ENST00000363615 91 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 RPS3AP1-201ENST00000413190 320 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 SNORD77.4-201ENST00000516158 81 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 RNU6-197P-201ENST00000516680 100 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 FAM71BP1-201ENST00000604431 523 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 MIR6857-201ENST00000613267 93 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 MIR6516-201ENST00000630554 81 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 MIR6866-201ENST00000638146 69 ntBASIC0.63□□□□□ -2.31
RPUSD4Q96CM3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 Y_RNA.210-201ENST00000364161 110 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 SNORD113.3-201ENST00000364630 78 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 RNU6-392P-201ENST00000364926 101 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 RNU6-580P-201ENST00000365159 107 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 RNU6-514P-201ENST00000384208 107 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 Y_RNA.527-201ENST00000384573 102 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 RNU6-985P-201ENST00000410182 104 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 RNU6-847P-201ENST00000411115 108 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 RPL21P38-201ENST00000418090 167 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 MTCO2P24-201ENST00000515611 426 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 SCARNA8-201ENST00000515924 131 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 MIR2115-201ENST00000516657 100 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 RNU7-149P-201ENST00000516739 59 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 AP003733.2-201ENST00000529409 171 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 MIR4724-201ENST00000579485 89 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 AC025627.3-201ENST00000582078 182 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.62□□□□□ -2.31
RPUSD4Q96CM3 Y_RNA.84-201ENST00000363011 104 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 SNORA33.2-201ENST00000365413 134 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 SNORA51.10-201ENST00000384418 136 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 MIR215-201ENST00000384858 110 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 Y_RNA.587-201ENST00000391210 103 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 AC098869.1-201ENST00000481627 292 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 AC108729.3-201ENST00000513484 108 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 SERF1AP1-201ENST00000514575 187 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 AL353765.1-201ENST00000605514 183 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 AL359821.1-201ENST00000605519 182 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 AC015726.2-201ENST00000620112 122 ntBASIC0.61□□□□□ -2.31
RPUSD4Q96CM3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 MIR367-201ENST00000362299 68 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 Y_RNA.14-201ENST00000362415 103 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-34-201ENST00000362441 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-12-201ENST00000362583 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-29-201ENST00000362834 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-9-201ENST00000362912 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-21-201ENST00000362963 81 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-14-201ENST00000363090 81 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-13-201ENST00000363358 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-41-201ENST00000363608 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-11-201ENST00000363616 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-5-201ENST00000363633 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-39-201ENST00000363694 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-4-201ENST00000363810 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-16-201ENST00000363887 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-6-201ENST00000363942 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-42-201ENST00000364273 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-15-201ENST00000364809 81 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-1-201ENST00000364961 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-26-201ENST00000365067 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-10-201ENST00000365073 81 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 RNU6-806P-201ENST00000365147 105 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-43-201ENST00000365503 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD115-36-201ENST00000365629 82 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 SNORD24-201ENST00000383884 75 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 RNU6-1227P-201ENST00000383981 107 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 Y_RNA.547-201ENST00000384654 119 ntBASIC0.6□□□□□ -2.31
RPUSD4Q96CM3 RNU6-1203P-201ENST00000410703 110 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms