Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR4778-201ENST00000577635 80 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 MIR4762-201ENST00000585261 75 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 RMST_2.1-201ENST00000617263 136 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 AL365265.1-201ENST00000621045 234 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 RNU6-653P-201ENST00000363074 106 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.304-201ENST00000365011 112 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 RNU6-53P-201ENST00000365367 106 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 SNORD114-22-201ENST00000365423 72 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.552-201ENST00000384665 112 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 MIR1278-201ENST00000408753 81 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 RN7SKP51-201ENST00000410781 304 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 RNU6-383P-201ENST00000410864 94 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 AC023449.1-201ENST00000454464 154 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 RNU6-437P-201ENST00000459408 95 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 RPL30P7-201ENST00000479312 323 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.63□□□□□ -2.15
HERC6Q8IVU3 AL078603.1-201ENST00000603824 313 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 AL513534.2-201ENST00000603836 250 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 AC091895.1-201ENST00000624494 256 ntBASIC1.63□□□□□ -2.15
HERC6Q8IVU3 RNU6-1205P-201ENST00000363625 106 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.274-201ENST00000364714 101 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 SNORA2.2-201ENST00000365473 135 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 MIR1298-201ENST00000408783 112 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 HMGN2P32-201ENST00000444648 269 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 RNA5SP220-201ENST00000516298 104 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 RNU6-794P-201ENST00000517261 64 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 AC087685.1-201ENST00000587507 141 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 AL365434.2-201ENST00000607979 234 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 AC106754.2-201ENST00000623006 233 ntBASIC1.62□□□□□ -2.15
HERC6Q8IVU3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HERC6Q8IVU3 MIRLET7C-201ENST00000362160 84 ntBASIC1.61□□□□□ -2.15
HERC6Q8IVU3 RNU6-674P-201ENST00000363831 107 ntBASIC1.61□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.61□□□□□ -2.15
HERC6Q8IVU3 MIR522-201ENST00000385071 87 ntBASIC1.61□□□□□ -2.15
HERC6Q8IVU3 MIR802-201ENST00000390235 94 ntBASIC1.61□□□□□ -2.15
HERC6Q8IVU3 AL354695.1-201ENST00000427935 228 ntBASIC1.61□□□□□ -2.15
HERC6Q8IVU3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.61□□□□□ -2.15
HERC6Q8IVU3 AP001485.1-201ENST00000604799 199 ntBASIC1.61□□□□□ -2.15
HERC6Q8IVU3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.199-201ENST00000364014 102 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.200-201ENST00000364018 102 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 RNU6-200P-201ENST00000364743 107 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 MIR452-201ENST00000385020 85 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 MIR626-201ENST00000385032 94 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 AL451046.2-201ENST00000403074 277 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 COX6CP14-201ENST00000469580 174 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 AC114811.1-201ENST00000507207 168 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 RNU6-138P-201ENST00000515952 107 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 AC100767.1-201ENST00000528178 123 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 MIR6734-201ENST00000621166 68 ntBASIC1.6□□□□□ -2.15
HERC6Q8IVU3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.515-201ENST00000384535 112 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 RNU6-907P-201ENST00000390924 102 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 RNU6-847P-201ENST00000411115 108 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 PIGPP3-201ENST00000425307 415 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 AC093850.1-201ENST00000454121 251 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.59□□□□□ -2.15
HERC6Q8IVU3 SCARNA8-201ENST00000515924 131 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 SNORD45.4-201ENST00000516629 73 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.59□□□□□ -2.15
HERC6Q8IVU3 AC090049.2-201ENST00000550377 109 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 MIR4308-201ENST00000580634 81 ntBASIC1.59□□□□□ -2.15
HERC6Q8IVU3 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.16
HERC6Q8IVU3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HERC6Q8IVU3 Y_RNA.83-201ENST00000363005 113 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 RNU6-923P-201ENST00000364753 107 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 Y_RNA.308-201ENST00000365043 101 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 RNU6-47P-201ENST00000383866 107 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 RNU6-969P-201ENST00000383900 105 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 MIR653-201ENST00000385279 96 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 RNU6-453P-201ENST00000516819 85 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 AL357312.1-201ENST00000603879 298 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 MIR6078-201ENST00000611069 100 ntBASIC1.58□□□□□ -2.16
HERC6Q8IVU3 MIR411-201ENST00000362239 96 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 SNORD14E-201ENST00000364009 85 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 Y_RNA.262-201ENST00000364641 102 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 MIR526A2-201ENST00000390198 65 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 RNU6-493P-201ENST00000391321 108 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.57□□□□□ -2.16
HERC6Q8IVU3 AC092991.1-201ENST00000477176 376 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.57□□□□□ -2.16
HERC6Q8IVU3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HERC6Q8IVU3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.56□□□□□ -2.16
HERC6Q8IVU3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
HERC6Q8IVU3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HERC6Q8IVU3 Y_RNA.297-201ENST00000364950 91 ntBASIC1.56□□□□□ -2.16
HERC6Q8IVU3 SNORA8.3-201ENST00000384679 139 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms