Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU6-860P-201ENST00000410860 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-785P-201ENST00000411324 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 AF228730.4-201ENST00000421457 183 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 AC024067.1-201ENST00000426199 223 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU7-102P-201ENST00000458948 62 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 AC091951.2-201ENST00000500762 203 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RPL23AP91-201ENST00000569211 455 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 DEFB117-201ENST00000602356 141 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 AL080274.1-201ENST00000605565 220 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 U6.90-201ENST00000614007 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 U6.70-201ENST00000620287 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 MIR125B2-201ENST00000385128 89 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 SNORA75.6-201ENST00000391318 127 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 MIR1278-201ENST00000408753 81 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 AC236972.2-201ENST00000434979 310 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 MIR18B-201ENST00000454574 71 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 RNU6-437P-201ENST00000459408 95 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.02□□□□□ -2.41
ZNF404Q494X3 AC112693.2-201ENST00000556538 232 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.02□□□□□ -2.41
ZNF404Q494X3 U2.1-201ENST00000618978 145 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 TPTEP1-208ENST00000636884 213 ntBASIC-0.02□□□□□ -2.41
ZNF404Q494X3 RNA5SP117-201ENST00000365294 118 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 SNORA24-201ENST00000384096 131 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 MIR518F-201ENST00000384973 87 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 MIR1257-201ENST00000408490 117 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 RNU6-720P-201ENST00000516363 108 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 MIR3678-201ENST00000578455 94 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 MIR4768-201ENST00000585270 74 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 AC090517.2-201ENST00000614966 680 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 MIR6740-201ENST00000618268 113 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 U6.92-201ENST00000636464 89 ntBASIC-0.03□□□□□ -2.41
ZNF404Q494X3 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 SNORD114-9-201ENST00000364370 72 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 SNORD38B-201ENST00000384690 67 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 RNU7-67P-201ENST00000459003 62 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 SNORD11-201ENST00000459124 84 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 RNU7-185P-201ENST00000459215 60 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 RNU7-25P-201ENST00000516544 62 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 MIR5190-201ENST00000581537 80 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 SNORD92-201ENST00000585078 85 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 SNORD38B-202ENST00000625943 69 ntBASIC-0.04□□□□□ -2.42
ZNF404Q494X3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.05□□□□□ -2.42
ZNF404Q494X3 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 RNA5SP457-201ENST00000363657 124 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 RNU6-674P-201ENST00000363831 107 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 RNU6-708P-201ENST00000384217 107 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 MIR1277-201ENST00000408536 78 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 RNU6-370P-201ENST00000411008 104 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.05□□□□□ -2.42
ZNF404Q494X3 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 RNU6-911P-201ENST00000516523 104 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 RNU7-156P-201ENST00000517214 74 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.05□□□□□ -2.42
ZNF404Q494X3 MIR4423-201ENST00000580922 80 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 MIR2909-201ENST00000617113 69 ntBASIC-0.05□□□□□ -2.42
ZNF404Q494X3 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-34-201ENST00000362441 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-12-201ENST00000362583 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-29-201ENST00000362834 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-9-201ENST00000362912 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-21-201ENST00000362963 81 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-14-201ENST00000363090 81 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-13-201ENST00000363358 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 RNA5SP214-201ENST00000363378 118 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-41-201ENST00000363608 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-11-201ENST00000363616 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-5-201ENST00000363633 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-39-201ENST00000363694 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-4-201ENST00000363810 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-16-201ENST00000363887 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-6-201ENST00000363942 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-42-201ENST00000364273 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-15-201ENST00000364809 81 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-1-201ENST00000364961 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-26-201ENST00000365067 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-10-201ENST00000365073 81 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-43-201ENST00000365503 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 SNORD115-36-201ENST00000365629 82 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 RNU6-310P-201ENST00000384655 107 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 MIR588-201ENST00000384900 83 ntBASIC-0.06□□□□□ -2.42
ZNF404Q494X3 MIR548O-201ENST00000408583 114 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms