Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 MIR548AO-201ENST00000579992 96 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 MIR2681-201ENST00000581814 105 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 AC015726.2-201ENST00000620112 122 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 AC090971.5-201ENST00000621102 293 ntBASIC0.57□□□□□ -2.32
RFX4Q33E94 Y_RNA.183-201ENST00000363882 113 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 Y_RNA.242-201ENST00000364473 110 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 RNU6-1067P-201ENST00000384752 107 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 RNU6-1248P-201ENST00000391096 64 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 RNU6-613P-201ENST00000410412 108 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 RNU6-383P-201ENST00000410864 94 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.56□□□□□ -2.32
RFX4Q33E94 Y_RNA.637-201ENST00000459424 114 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 AC113410.1-201ENST00000505029 247 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 AC012433.1-201ENST00000588916 398 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 C8orf59P2-201ENST00000603441 271 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 7SK.10-201ENST00000621414 298 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 MTND1P7-201ENST00000632801 297 ntBASIC0.56□□□□□ -2.32
RFX4Q33E94 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
RFX4Q33E94 RNU6-899P-201ENST00000363947 107 ntBASIC0.55□□□□□ -2.32
RFX4Q33E94 Y_RNA.224-201ENST00000364308 111 ntBASIC0.55□□□□□ -2.32
RFX4Q33E94 SNORD113.3-201ENST00000364630 78 ntBASIC0.55□□□□□ -2.32
RFX4Q33E94 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.55□□□□□ -2.32
RFX4Q33E94 U7.7-201ENST00000459276 60 ntBASIC0.55□□□□□ -2.32
RFX4Q33E94 RNU2-13P-201ENST00000515909 113 ntBASIC0.55□□□□□ -2.32
RFX4Q33E94 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.55□□□□□ -2.32
RFX4Q33E94 MIR4791-201ENST00000607666 84 ntBASIC0.55□□□□□ -2.32
RFX4Q33E94 AL021707.8-201ENST00000609428 183 ntBASIC0.55□□□□□ -2.32
RFX4Q33E94 AC090574.1-201ENST00000623186 233 ntBASIC0.55□□□□□ -2.32
RFX4Q33E94 AC022140.2-201ENST00000623500 188 ntBASIC0.55□□□□□ -2.32
RFX4Q33E94 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
RFX4Q33E94 Y_RNA.238-201ENST00000364441 102 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 SNORA63.7-201ENST00000365579 123 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 Y_RNA.370-201ENST00000365589 108 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 SNORA51.10-201ENST00000384418 136 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 SNORA2B-201ENST00000384583 137 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 Y_RNA.569-201ENST00000384749 103 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 Y_RNA.581-201ENST00000391017 97 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 SNORD111-201ENST00000408139 94 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 MIR1252-201ENST00000408861 65 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 AC067940.1-201ENST00000458411 300 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 AC098869.1-201ENST00000481627 292 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 RNU6-1110P-201ENST00000516462 101 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 RNU7-25P-201ENST00000516544 62 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 AC004812.1-201ENST00000540773 146 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 AC025627.3-201ENST00000582078 182 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 AL078603.1-201ENST00000603824 313 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 AC104465.1-201ENST00000611365 139 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 MIR6788-201ENST00000618842 66 ntBASIC0.54□□□□□ -2.32
RFX4Q33E94 RNU6-369P-201ENST00000362515 102 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 Y_RNA.28-201ENST00000362554 111 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 RNU4-90P-201ENST00000362773 141 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 snoU2_19.2-201ENST00000363024 80 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 RNU6-1205P-201ENST00000363625 106 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 SNORD45.3-201ENST00000363836 72 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 Y_RNA.431-201ENST00000384086 102 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 Y_RNA.494-201ENST00000384432 111 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 Y_RNA.537-201ENST00000384626 109 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
RFX4Q33E94 MIR1287-201ENST00000408492 90 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 MIR548J-201ENST00000408833 112 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.53□□□□□ -2.32
RFX4Q33E94 AL136317.1-201ENST00000612653 226 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 AC013791.1-201ENST00000616619 62 ntBASIC0.53□□□□□ -2.32
RFX4Q33E94 Y_RNA.26-201ENST00000362539 101 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 RNU6-806P-201ENST00000365147 105 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 Y_RNA.541-201ENST00000384640 113 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 Y_RNA.547-201ENST00000384654 119 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 MIR215-201ENST00000384858 110 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 MIR1827-201ENST00000408549 66 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 RNU6-994P-201ENST00000410507 111 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 AC090844.1-201ENST00000422019 156 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 ELOCP20-201ENST00000422460 345 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 AC005534.2-201ENST00000431047 433 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 snoU13.21-201ENST00000459368 105 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 RNA5SP220-201ENST00000516298 104 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 MIR2115-201ENST00000516657 100 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 RNU7-149P-201ENST00000516739 59 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 AC007751.1-201ENST00000529260 376 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 MIR151B-201ENST00000584249 96 ntBASIC0.52□□□□□ -2.33
RFX4Q33E94 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
RFX4Q33E94 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
RFX4Q33E94 RNU6-1272P-201ENST00000362776 107 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 Y_RNA.138-201ENST00000363462 102 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 Y_RNA.168-201ENST00000363740 102 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 Y_RNA.214-201ENST00000364201 112 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 Y_RNA.226-201ENST00000364337 114 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 RNU6-290P-201ENST00000365212 101 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 Y_RNA.389-201ENST00000383924 113 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 RNU6-125P-201ENST00000384505 107 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 RNU6-110P-201ENST00000384508 104 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.51□□□□□ -2.33
RFX4Q33E94 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 MIR548O-201ENST00000408583 114 ntBASIC0.51□□□□□ -2.33
RFX4Q33E94 AC022028.1-201ENST00000412054 408 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms