Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CX3CR1P49238 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CX3CR1P49238 Y_RNA.26-201ENST00000362539 101 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 SNORD113.3-201ENST00000364630 78 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 RNY1P8-201ENST00000383970 114 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 RNU6-823P-201ENST00000391042 103 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 SNORD111-201ENST00000408139 94 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 RNU6-613P-201ENST00000410412 108 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 MTCO1P5-201ENST00000433573 344 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 RPS29P1-201ENST00000465274 159 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 RNU7-25P-201ENST00000516544 62 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 RNU11-2P-201ENST00000516898 142 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 Y_RNA.714-201ENST00000517065 90 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 AC007751.1-201ENST00000529260 376 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.48□□□□□ -2.33
CX3CR1P49238 AC087685.1-201ENST00000587507 141 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 MIR4791-201ENST00000607666 84 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.48□□□□□ -2.33
CX3CR1P49238 AC022140.2-201ENST00000623500 188 ntBASIC0.48□□□□□ -2.33
CX3CR1P49238 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
CX3CR1P49238 Y_RNA.136-201ENST00000363444 102 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 RNU6-806P-201ENST00000365147 105 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 RNU6-125P-201ENST00000384505 107 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 SNORA2B-201ENST00000384583 137 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 MIR215-201ENST00000384858 110 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CX3CR1P49238 AC024067.1-201ENST00000426199 223 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 AC015818.7-201ENST00000428754 109 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 MTATP6P23-201ENST00000440153 476 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 AC087499.7-201ENST00000441958 109 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 RNU6-1110P-201ENST00000516462 101 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 AC124312.5-201ENST00000604451 268 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 uc_338.6-201ENST00000613544 171 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 MIR376A1-201ENST00000616574 68 ntBASIC0.47□□□□□ -2.33
CX3CR1P49238 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CX3CR1P49238 snoU2_19.2-201ENST00000363024 80 ntBASIC0.46□□□□□ -2.34
CX3CR1P49238 Y_RNA.547-201ENST00000384654 119 ntBASIC0.46□□□□□ -2.34
CX3CR1P49238 MIR1827-201ENST00000408549 66 ntBASIC0.46□□□□□ -2.34
CX3CR1P49238 AC067940.1-201ENST00000458411 300 ntBASIC0.46□□□□□ -2.34
CX3CR1P49238 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
CX3CR1P49238 C8orf59P2-201ENST00000603441 271 ntBASIC0.46□□□□□ -2.34
CX3CR1P49238 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
CX3CR1P49238 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
CX3CR1P49238 Y_RNA.183-201ENST00000363882 113 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 Y_RNA.370-201ENST00000365589 108 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 Y_RNA.445-201ENST00000384168 102 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 SNORA51.10-201ENST00000384418 136 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 Y_RNA.526-201ENST00000384572 110 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 Y_RNA.537-201ENST00000384626 109 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 Y_RNA.541-201ENST00000384640 113 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 RPL21P38-201ENST00000418090 167 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 ELOCP20-201ENST00000422460 345 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
CX3CR1P49238 RNU6-1170P-201ENST00000515974 106 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 Y_RNA.713-201ENST00000517013 96 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.45□□□□□ -2.34
CX3CR1P49238 AC011195.1-201ENST00000578177 177 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 AL136317.1-201ENST00000612653 226 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 MIR6504-201ENST00000613520 61 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 MIR8070-201ENST00000616510 88 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 AC007742.2-201ENST00000618226 398 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
CX3CR1P49238 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.45□□□□□ -2.34
CX3CR1P49238 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
CX3CR1P49238 Y_RNA.168-201ENST00000363740 102 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 RNU6-899P-201ENST00000363947 107 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 Y_RNA.191-201ENST00000363972 113 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 RNU4-10P-201ENST00000364383 140 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 RNU6-580P-201ENST00000365159 107 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 Y_RNA.424-201ENST00000384063 103 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 Y_RNA.569-201ENST00000384749 103 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 RNU6-1067P-201ENST00000384752 107 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 RNU6-205P-201ENST00000390858 107 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 Y_RNA.581-201ENST00000391017 97 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 MIR548O-201ENST00000408583 114 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 RNU6-994P-201ENST00000410507 111 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 RNU6-938P-201ENST00000411285 103 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 AC091959.1-201ENST00000495857 238 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 Y_RNA.666-201ENST00000516187 112 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 MIR2115-201ENST00000516657 100 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 RNU7-149P-201ENST00000516739 59 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.44□□□□□ -2.34
CX3CR1P49238 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.44□□□□□ -2.34
CX3CR1P49238 MIR2681-201ENST00000581814 105 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 AL049861.1-201ENST00000603130 150 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 AC013791.1-201ENST00000616619 62 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 AC090971.5-201ENST00000621102 293 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 AC090574.1-201ENST00000623186 233 ntBASIC0.44□□□□□ -2.34
CX3CR1P49238 Y_RNA.138-201ENST00000363462 102 ntBASIC0.43□□□□□ -2.34
CX3CR1P49238 Y_RNA.214-201ENST00000364201 112 ntBASIC0.43□□□□□ -2.34
CX3CR1P49238 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CX3CR1P49238 RNU6-662P-201ENST00000384253 104 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms