Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL008718.3-201ENST00000610217 321 ntBASIC1.07□□□□□ -2.24
LHX1P48742 Pinc.1-201ENST00000616452 154 ntBASIC1.07□□□□□ -2.24
LHX1P48742 AL442644.1-201ENST00000454390 3105 ntBASIC1.07□□□□□ -2.24
LHX1P48742 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
LHX1P48742 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LHX1P48742 Y_RNA.226-201ENST00000364337 114 ntBASIC1.06□□□□□ -2.24
LHX1P48742 Y_RNA.512-201ENST00000384518 102 ntBASIC1.06□□□□□ -2.24
LHX1P48742 RNA5SP496-201ENST00000391240 109 ntBASIC1.06□□□□□ -2.24
LHX1P48742 AL603910.2-201ENST00000407268 136 ntBASIC1.06□□□□□ -2.24
LHX1P48742 snoU13.25-201ENST00000458945 104 ntBASIC1.06□□□□□ -2.24
LHX1P48742 RNU7-41P-201ENST00000515917 61 ntBASIC1.06□□□□□ -2.24
LHX1P48742 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
LHX1P48742 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.06□□□□□ -2.24
LHX1P48742 PRELID3BP2-201ENST00000605362 201 ntBASIC1.06□□□□□ -2.24
LHX1P48742 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.06□□□□□ -2.24
LHX1P48742 SNORD114-27-201ENST00000363766 70 ntBASIC1.05□□□□□ -2.24
LHX1P48742 RNU6-694P-201ENST00000364071 147 ntBASIC1.05□□□□□ -2.24
LHX1P48742 Y_RNA.275-201ENST00000364726 110 ntBASIC1.05□□□□□ -2.24
LHX1P48742 Y_RNA.376-201ENST00000365638 108 ntBASIC1.05□□□□□ -2.24
LHX1P48742 RNA5SP247-201ENST00000411181 105 ntBASIC1.05□□□□□ -2.24
LHX1P48742 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
LHX1P48742 AC063976.4-201ENST00000421971 163 ntBASIC1.05□□□□□ -2.24
LHX1P48742 RNU6-830P-201ENST00000516353 107 ntBASIC1.05□□□□□ -2.24
LHX1P48742 AL049861.1-201ENST00000603130 150 ntBASIC1.05□□□□□ -2.24
LHX1P48742 AL021707.8-201ENST00000609428 183 ntBASIC1.05□□□□□ -2.24
LHX1P48742 AC006441.5-201ENST00000612680 209 ntBASIC1.05□□□□□ -2.24
LHX1P48742 AP001282.2-201ENST00000616149 309 ntBASIC1.05□□□□□ -2.24
LHX1P48742 uc_338.4-201ENST00000616635 176 ntBASIC1.05□□□□□ -2.24
LHX1P48742 AC015726.2-201ENST00000620112 122 ntBASIC1.05□□□□□ -2.24
LHX1P48742 U6.104-201ENST00000637979 90 ntBASIC1.05□□□□□ -2.24
LHX1P48742 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.05□□□□□ -2.24
LHX1P48742 AC068700.1-201ENST00000565862 3754 ntBASIC1.05□□□□□ -2.24
LHX1P48742 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
LHX1P48742 Y_RNA.44-201ENST00000362676 108 ntBASIC1.04□□□□□ -2.24
LHX1P48742 RNA5SP264-201ENST00000363115 107 ntBASIC1.04□□□□□ -2.24
LHX1P48742 Y_RNA.145-201ENST00000363527 102 ntBASIC1.04□□□□□ -2.24
LHX1P48742 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
LHX1P48742 RNA5SP48-201ENST00000363969 126 ntBASIC1.04□□□□□ -2.24
LHX1P48742 Y_RNA.191-201ENST00000363972 113 ntBASIC1.04□□□□□ -2.24
LHX1P48742 Y_RNA.237-201ENST00000364439 102 ntBASIC1.04□□□□□ -2.24
LHX1P48742 RNU1-93P-201ENST00000364704 169 ntBASIC1.04□□□□□ -2.24
LHX1P48742 RNU6-211P-201ENST00000384047 107 ntBASIC1.04□□□□□ -2.24
LHX1P48742 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
LHX1P48742 RNU6-1289P-201ENST00000384431 106 ntBASIC1.04□□□□□ -2.24
LHX1P48742 MIR526A2-201ENST00000390198 65 ntBASIC1.04□□□□□ -2.24
LHX1P48742 RN7SKP164-201ENST00000516138 266 ntBASIC1.04□□□□□ -2.24
LHX1P48742 RNU6-113P-201ENST00000516653 101 ntBASIC1.04□□□□□ -2.24
LHX1P48742 RNU7-149P-201ENST00000516739 59 ntBASIC1.04□□□□□ -2.24
LHX1P48742 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.04□□□□□ -2.24
LHX1P48742 AC006006.1-201ENST00000603082 144 ntBASIC1.04□□□□□ -2.24
LHX1P48742 Y_RNA.802-201ENST00000614892 130 ntBASIC1.04□□□□□ -2.24
LHX1P48742 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.04□□□□□ -2.24
LHX1P48742 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LHX1P48742 MIR103A2-201ENST00000362154 78 ntBASIC1.03□□□□□ -2.24
LHX1P48742 SNORA25.3-201ENST00000363205 127 ntBASIC1.03□□□□□ -2.24
LHX1P48742 SNORA63C-201ENST00000364578 129 ntBASIC1.03□□□□□ -2.24
LHX1P48742 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
LHX1P48742 SNORA75.2-201ENST00000391138 150 ntBASIC1.03□□□□□ -2.24
LHX1P48742 SNORA75.3-201ENST00000391231 150 ntBASIC1.03□□□□□ -2.24
LHX1P48742 U8.17-201ENST00000391292 132 ntBASIC1.03□□□□□ -2.24
LHX1P48742 MIR1302-6-201ENST00000408466 90 ntBASIC1.03□□□□□ -2.24
LHX1P48742 MIR1287-201ENST00000408492 90 ntBASIC1.03□□□□□ -2.24
LHX1P48742 AC002429.1-201ENST00000437672 148 ntBASIC1.03□□□□□ -2.24
LHX1P48742 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.03□□□□□ -2.24
LHX1P48742 RPS26P48-201ENST00000491713 339 ntBASIC1.03□□□□□ -2.24
LHX1P48742 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.03□□□□□ -2.24
LHX1P48742 MIR548AR-201ENST00000582191 57 ntBASIC1.03□□□□□ -2.24
LHX1P48742 AC008737.2-201ENST00000599446 118 ntBASIC1.03□□□□□ -2.24
LHX1P48742 MIR8062-201ENST00000621515 85 ntBASIC1.03□□□□□ -2.24
LHX1P48742 AC008133.2-201ENST00000624540 351 ntBASIC1.03□□□□□ -2.24
LHX1P48742 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
LHX1P48742 Y_RNA.117-201ENST00000363294 101 ntBASIC1.02□□□□□ -2.25
LHX1P48742 RNU4-10P-201ENST00000364383 140 ntBASIC1.02□□□□□ -2.25
LHX1P48742 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
LHX1P48742 Y_RNA.461-201ENST00000384263 103 ntBASIC1.02□□□□□ -2.25
LHX1P48742 Y_RNA.574-201ENST00000384766 95 ntBASIC1.02□□□□□ -2.25
LHX1P48742 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
LHX1P48742 SNORD28B-201ENST00000390993 75 ntBASIC1.02□□□□□ -2.25
LHX1P48742 RNU7-21P-201ENST00000459430 62 ntBASIC1.02□□□□□ -2.25
LHX1P48742 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
LHX1P48742 MIR5688-201ENST00000580619 83 ntBASIC1.02□□□□□ -2.25
LHX1P48742 MIR4452-201ENST00000583004 71 ntBASIC1.02□□□□□ -2.25
LHX1P48742 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
LHX1P48742 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
LHX1P48742 AC008163.1-202ENST00000636004 2889 ntBASIC1.02□□□□□ -2.25
LHX1P48742 MIR6767-201ENST00000637302 66 ntBASIC1.02□□□□□ -2.25
LHX1P48742 MIR335-201ENST00000362173 94 ntBASIC1.01□□□□□ -2.25
LHX1P48742 Y_RNA.176-201ENST00000363815 109 ntBASIC1.01□□□□□ -2.25
LHX1P48742 SNORA8.3-201ENST00000384679 139 ntBASIC1.01□□□□□ -2.25
LHX1P48742 RNU6-1067P-201ENST00000384752 107 ntBASIC1.01□□□□□ -2.25
LHX1P48742 MIR548F4-201ENST00000408515 105 ntBASIC1.01□□□□□ -2.25
LHX1P48742 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.01□□□□□ -2.25
LHX1P48742 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
LHX1P48742 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.01□□□□□ -2.25
LHX1P48742 U2.14-201ENST00000615943 113 ntBASIC1.01□□□□□ -2.25
LHX1P48742 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.01□□□□□ -2.25
LHX1P48742 MIR4251-201ENST00000635819 61 ntBASIC1.01□□□□□ -2.25
LHX1P48742 RNU6-740P-201ENST00000364734 105 ntBASIC1□□□□□ -2.25
LHX1P48742 RNU6-1138P-201ENST00000365359 106 ntBASIC1□□□□□ -2.25
LHX1P48742 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms