Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Y_RNA.149-201ENST00000363558 117 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 Y_RNA.237-201ENST00000364439 102 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 Y_RNA.275-201ENST00000364726 110 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 SNORD38C-201ENST00000384381 69 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 Y_RNA.518-201ENST00000384552 113 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 MIR526A2-201ENST00000390198 65 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 BTF3P11-201ENST00000426582 477 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.1□□□□□ -2.23
NEDD4P46934 SNORD11-201ENST00000459124 84 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 NDUFA4P2-201ENST00000489989 244 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 RNU6-165P-201ENST00000517170 99 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 AC090142.3-201ENST00000519012 385 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 MIR3973-201ENST00000579824 107 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 AC008507.4-201ENST00000585464 127 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 AL442644.1-201ENST00000454390 3105 ntBASIC1.1□□□□□ -2.23
NEDD4P46934 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
NEDD4P46934 MIR367-201ENST00000362299 68 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 Y_RNA.466-201ENST00000384294 113 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 RNU6-1289P-201ENST00000384431 106 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 MIR1278-201ENST00000408753 81 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.09□□□□□ -2.24
NEDD4P46934 RNU6-830P-201ENST00000516353 107 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 SNORA74.3-201ENST00000517108 154 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.09□□□□□ -2.24
NEDD4P46934 AL078603.1-201ENST00000603824 313 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 AL360085.1-201ENST00000604713 532 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 AC022709.1-201ENST00000615967 87 ntBASIC1.09□□□□□ -2.24
NEDD4P46934 Y_RNA.47-201ENST00000362697 108 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 Y_RNA.162-201ENST00000363683 102 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 Y_RNA.293-201ENST00000364908 93 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 Y_RNA.461-201ENST00000384263 103 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 Y_RNA.512-201ENST00000384518 102 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 Y_RNA.556-201ENST00000384677 113 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 AL358176.2-201ENST00000425769 204 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
NEDD4P46934 RNU6-327P-201ENST00000516270 127 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.08□□□□□ -2.24
NEDD4P46934 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.08□□□□□ -2.24
NEDD4P46934 AL008718.3-201ENST00000610217 321 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 Y_RNA.802-201ENST00000614892 130 ntBASIC1.08□□□□□ -2.24
NEDD4P46934 Y_RNA.354-201ENST00000365448 111 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 RNU6-211P-201ENST00000384047 107 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 MIR520E-201ENST00000384867 87 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 MIR516B2-201ENST00000385190 85 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.07□□□□□ -2.24
NEDD4P46934 SNORA31.4-201ENST00000516049 129 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 RNU6-947P-201ENST00000516264 106 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 RNU6-1045P-201ENST00000516321 107 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.07□□□□□ -2.24
NEDD4P46934 MIR4698-201ENST00000577795 80 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 AC006441.5-201ENST00000612680 209 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 U2.14-201ENST00000615943 113 ntBASIC1.07□□□□□ -2.24
NEDD4P46934 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.82-201ENST00000363000 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.92-201ENST00000363043 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.235-201ENST00000364412 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.306-201ENST00000365015 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.312-201ENST00000365089 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.322-201ENST00000365151 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 MT-TW-201ENST00000387382 68 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 RNU6-383P-201ENST00000410864 94 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 SNRPGP14-201ENST00000435400 219 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.650-201ENST00000459002 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 MTCO2P24-201ENST00000515611 426 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 RNU7-43P-201ENST00000516554 64 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.777-201ENST00000516982 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.771-201ENST00000598668 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 AC006006.1-201ENST00000603082 144 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 AL021707.8-201ENST00000609428 183 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 uc_338.4-201ENST00000616635 176 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 Y_RNA.789-201ENST00000622480 102 ntBASIC1.06□□□□□ -2.24
NEDD4P46934 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
NEDD4P46934 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
NEDD4P46934 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NEDD4P46934 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 RNU6-268P-201ENST00000364174 107 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 RNU6-740P-201ENST00000364734 105 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 Y_RNA.483-201ENST00000384380 101 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 SNORA8.3-201ENST00000384679 139 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 MIR520C-201ENST00000385005 87 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 AL078595.1-201ENST00000404458 226 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 MTND2P23-201ENST00000422990 651 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 AC245047.7-201ENST00000440265 293 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 SNORD2.1-201ENST00000458762 69 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 SCARNA15.1-201ENST00000516384 125 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 RNU6-126P-201ENST00000516685 103 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 SNORA70.22-201ENST00000517160 124 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 MIR4662B-201ENST00000579498 81 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 FAM71BP1-201ENST00000604431 523 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 Pinc.1-201ENST00000616452 154 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
NEDD4P46934 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.05□□□□□ -2.24
NEDD4P46934 RNU6-1309P-201ENST00000363305 108 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 SNORA25.8-201ENST00000364831 128 ntBASIC1.04□□□□□ -2.24
NEDD4P46934 RNU6-1138P-201ENST00000365359 106 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 202.8 ms