Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNA5SP481-201ENST00000516814 122 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 MIR4529-201ENST00000578110 78 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 AL359881.1-201ENST00000602916 267 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL6A2P12110 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL6A2P12110 AC080100.1-201ENST00000624239 5356 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
COL6A2P12110 RNU6-834P-201ENST00000362367 110 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 Y_RNA.114-201ENST00000363265 113 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 RNA5SP68-201ENST00000363885 119 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 SNORD115-28-201ENST00000363931 81 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 RNU6-309P-201ENST00000364573 106 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 Y_RNA.294-201ENST00000364916 102 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 SNORA4.2-201ENST00000365313 147 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 RNA5SP450-201ENST00000411206 102 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.3□□□□□ -2.04
COL6A2P12110 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.3□□□□□ -2.04
COL6A2P12110 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.3□□□□□ -2.04
COL6A2P12110 RNU7-25P-201ENST00000516544 62 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 SCARNA15-202ENST00000516881 127 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.3□□□□□ -2.04
COL6A2P12110 MIR5197-201ENST00000583721 112 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 MTND5P32-201ENST00000560711 1802 ntBASIC2.3□□□□□ -2.04
COL6A2P12110 RNU6-163P-201ENST00000384396 106 ntBASIC2.29□□□□□ -2.04
COL6A2P12110 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
COL6A2P12110 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.29□□□□□ -2.04
COL6A2P12110 RPL23AP63-201ENST00000498752 471 ntBASIC2.29□□□□□ -2.04
COL6A2P12110 RNA5SP168-201ENST00000516642 112 ntBASIC2.29□□□□□ -2.04
COL6A2P12110 RNA5SP437-201ENST00000517249 129 ntBASIC2.29□□□□□ -2.04
COL6A2P12110 RNU6-1116P-201ENST00000517269 99 ntBASIC2.29□□□□□ -2.04
COL6A2P12110 MIR6817-201ENST00000615588 66 ntBASIC2.29□□□□□ -2.04
COL6A2P12110 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
COL6A2P12110 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.29□□□□□ -2.04
COL6A2P12110 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL6A2P12110 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.28□□□□□ -2.04
COL6A2P12110 Y_RNA.37-201ENST00000362606 108 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 RNU6-647P-201ENST00000364243 107 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 RNU6-1189P-201ENST00000383958 107 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 SNORD38C-201ENST00000384381 69 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 U8.16-201ENST00000391279 133 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 RNU2-7P-201ENST00000410794 178 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 CALM2P4-201ENST00000430810 426 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 AC087499.4-201ENST00000448505 178 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 RNU7-107P-201ENST00000459121 61 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.28□□□□□ -2.04
COL6A2P12110 RNA5SP148-201ENST00000516527 94 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 MIR514B-201ENST00000516774 80 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 MIR4287-201ENST00000579398 78 ntBASIC2.28□□□□□ -2.04
COL6A2P12110 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.28□□□□□ -2.04
COL6A2P12110 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.28□□□□□ -2.04
COL6A2P12110 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
COL6A2P12110 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.27□□□□□ -2.05
COL6A2P12110 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL6A2P12110 RNA5SP100-201ENST00000410903 110 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 Y_RNA.617-201ENST00000410920 90 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 RNA5SP59-201ENST00000410922 110 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.27□□□□□ -2.05
COL6A2P12110 Y_RNA.651-201ENST00000459380 103 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 UBL5P3-201ENST00000475112 231 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 AC090255.1-201ENST00000495779 349 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 RNU6-113P-201ENST00000516653 101 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 RNU6-1149P-201ENST00000516810 97 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 AL022345.2-201ENST00000606307 135 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 MIR376A2-201ENST00000636782 80 ntBASIC2.27□□□□□ -2.05
COL6A2P12110 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL6A2P12110 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 RNU6-235P-201ENST00000362644 107 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 Y_RNA.353-201ENST00000365440 108 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 MIR17-201ENST00000385012 84 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 AL445646.1-201ENST00000431784 216 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 snoU13.27-201ENST00000459278 104 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 AC234781.5-201ENST00000508429 271 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 MIR4448-201ENST00000584360 86 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 AL513423.1-201ENST00000621695 132 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.26□□□□□ -2.05
COL6A2P12110 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.25□□□□□ -2.05
COL6A2P12110 RNU6-508P-201ENST00000363231 103 ntBASIC2.25□□□□□ -2.05
COL6A2P12110 SNORA70B-201ENST00000384210 135 ntBASIC2.25□□□□□ -2.05
COL6A2P12110 RNU6-938P-201ENST00000411285 103 ntBASIC2.25□□□□□ -2.05
COL6A2P12110 AC015922.2-201ENST00000435593 184 ntBASIC2.25□□□□□ -2.05
COL6A2P12110 RPS27P21-201ENST00000486977 252 ntBASIC2.25□□□□□ -2.05
COL6A2P12110 RNU2-19P-201ENST00000517288 84 ntBASIC2.25□□□□□ -2.05
COL6A2P12110 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.25□□□□□ -2.05
COL6A2P12110 MIR4709-201ENST00000577272 72 ntBASIC2.25□□□□□ -2.05
COL6A2P12110 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.25□□□□□ -2.05
COL6A2P12110 MIR3914-2-201ENST00000637339 95 ntBASIC2.25□□□□□ -2.05
COL6A2P12110 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.24□□□□□ -2.05
COL6A2P12110 RNU6-360P-201ENST00000390944 104 ntBASIC2.24□□□□□ -2.05
COL6A2P12110 AL021397.1-201ENST00000451806 248 ntBASIC2.24□□□□□ -2.05
COL6A2P12110 RNU7-12P-201ENST00000516030 62 ntBASIC2.24□□□□□ -2.05
COL6A2P12110 RNU1-41P-201ENST00000516161 162 ntBASIC2.24□□□□□ -2.05
COL6A2P12110 RNU1-48P-201ENST00000516400 162 ntBASIC2.24□□□□□ -2.05
COL6A2P12110 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms