Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VTNP04004 Y_RNA.193-201ENST00000363979 102 ntBASIC1.24□□□□□ -2.21
VTNP04004 Y_RNA.350-201ENST00000365409 98 ntBASIC1.24□□□□□ -2.21
VTNP04004 Y_RNA.416-201ENST00000384014 113 ntBASIC1.24□□□□□ -2.21
VTNP04004 Y_RNA.452-201ENST00000384202 108 ntBASIC1.24□□□□□ -2.21
VTNP04004 SNORA8.3-201ENST00000384679 139 ntBASIC1.24□□□□□ -2.21
VTNP04004 NDUFA4P2-201ENST00000489989 244 ntBASIC1.24□□□□□ -2.21
VTNP04004 RNU6-322P-201ENST00000516010 103 ntBASIC1.24□□□□□ -2.21
VTNP04004 Y_RNA.668-201ENST00000516233 93 ntBASIC1.24□□□□□ -2.21
VTNP04004 RNU6-1007P-201ENST00000516586 107 ntBASIC1.24□□□□□ -2.21
VTNP04004 MIR3128-201ENST00000581957 66 ntBASIC1.24□□□□□ -2.21
VTNP04004 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
VTNP04004 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
VTNP04004 Y_RNA.587-201ENST00000391210 103 ntBASIC1.23□□□□□ -2.21
VTNP04004 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.23□□□□□ -2.21
VTNP04004 SNORD116-28-201ENST00000516123 91 ntBASIC1.23□□□□□ -2.21
VTNP04004 RNU6-917P-201ENST00000516294 104 ntBASIC1.23□□□□□ -2.21
VTNP04004 AL512310.8-201ENST00000550183 120 ntBASIC1.23□□□□□ -2.21
VTNP04004 BX284668.6-201ENST00000606899 438 ntBASIC1.23□□□□□ -2.21
VTNP04004 AL365265.1-201ENST00000621045 234 ntBASIC1.23□□□□□ -2.21
VTNP04004 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.76-201ENST00000362931 109 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.82-201ENST00000363000 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.92-201ENST00000363043 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.116-201ENST00000363292 103 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.235-201ENST00000364412 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.306-201ENST00000365015 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.307-201ENST00000365022 117 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.312-201ENST00000365089 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.322-201ENST00000365151 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 SNORA2.2-201ENST00000365473 135 ntBASIC1.22□□□□□ -2.21
VTNP04004 MIR526A1-201ENST00000384897 85 ntBASIC1.22□□□□□ -2.21
VTNP04004 MIR452-201ENST00000385020 85 ntBASIC1.22□□□□□ -2.21
VTNP04004 SNORD72-201ENST00000390994 80 ntBASIC1.22□□□□□ -2.21
VTNP04004 AL451046.2-201ENST00000403074 277 ntBASIC1.22□□□□□ -2.21
VTNP04004 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.22□□□□□ -2.21
VTNP04004 HMGN2P32-201ENST00000444648 269 ntBASIC1.22□□□□□ -2.21
VTNP04004 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.650-201ENST00000459002 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 SNORD11-201ENST00000459124 84 ntBASIC1.22□□□□□ -2.21
VTNP04004 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
VTNP04004 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
VTNP04004 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.22□□□□□ -2.21
VTNP04004 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.777-201ENST00000516982 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.22□□□□□ -2.21
VTNP04004 CYP3A52P-201ENST00000563326 91 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.771-201ENST00000598668 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.789-201ENST00000622480 102 ntBASIC1.22□□□□□ -2.21
VTNP04004 MIR6767-201ENST00000637302 66 ntBASIC1.22□□□□□ -2.21
VTNP04004 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VTNP04004 Y_RNA.269-201ENST00000364685 89 ntBASIC1.21□□□□□ -2.22
VTNP04004 RNU1-93P-201ENST00000364704 169 ntBASIC1.21□□□□□ -2.22
VTNP04004 SNORA20.1-201ENST00000364790 130 ntBASIC1.21□□□□□ -2.22
VTNP04004 Y_RNA.292-201ENST00000364904 97 ntBASIC1.21□□□□□ -2.22
VTNP04004 RNU6-442P-201ENST00000383968 104 ntBASIC1.21□□□□□ -2.22
VTNP04004 Y_RNA.447-201ENST00000384184 113 ntBASIC1.21□□□□□ -2.22
VTNP04004 Y_RNA.518-201ENST00000384552 113 ntBASIC1.21□□□□□ -2.22
VTNP04004 Y_RNA.562-201ENST00000384695 113 ntBASIC1.21□□□□□ -2.22
VTNP04004 MIR626-201ENST00000385032 94 ntBASIC1.21□□□□□ -2.22
VTNP04004 RNA5SP496-201ENST00000391240 109 ntBASIC1.21□□□□□ -2.22
VTNP04004 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
VTNP04004 AC245047.8-201ENST00000456455 284 ntBASIC1.21□□□□□ -2.22
VTNP04004 MTND1P19-201ENST00000511780 315 ntBASIC1.21□□□□□ -2.22
VTNP04004 Y_RNA.680-201ENST00000516441 93 ntBASIC1.21□□□□□ -2.22
VTNP04004 AC090049.2-201ENST00000550377 109 ntBASIC1.21□□□□□ -2.22
VTNP04004 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.21□□□□□ -2.22
VTNP04004 AL513534.2-201ENST00000603836 250 ntBASIC1.21□□□□□ -2.22
VTNP04004 uc_338.4-201ENST00000616635 176 ntBASIC1.21□□□□□ -2.22
VTNP04004 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VTNP04004 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
VTNP04004 Y_RNA.60-201ENST00000362831 98 ntBASIC1.2□□□□□ -2.22
VTNP04004 Y_RNA.336-201ENST00000365307 109 ntBASIC1.2□□□□□ -2.22
VTNP04004 Y_RNA.355-201ENST00000365462 98 ntBASIC1.2□□□□□ -2.22
VTNP04004 MIR136-201ENST00000385207 82 ntBASIC1.2□□□□□ -2.22
VTNP04004 MIR526A2-201ENST00000390198 65 ntBASIC1.2□□□□□ -2.22
VTNP04004 SNORD2.1-201ENST00000458762 69 ntBASIC1.2□□□□□ -2.22
VTNP04004 RNY3P16-201ENST00000516338 101 ntBASIC1.2□□□□□ -2.22
VTNP04004 AC090142.3-201ENST00000519012 385 ntBASIC1.2□□□□□ -2.22
VTNP04004 AC008507.4-201ENST00000585464 127 ntBASIC1.2□□□□□ -2.22
VTNP04004 AC087685.1-201ENST00000587507 141 ntBASIC1.2□□□□□ -2.22
VTNP04004 AL442067.1-201ENST00000613261 223 ntBASIC1.2□□□□□ -2.22
VTNP04004 Pinc.1-201ENST00000616452 154 ntBASIC1.2□□□□□ -2.22
VTNP04004 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VTNP04004 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
VTNP04004 Y_RNA.229-201ENST00000364347 113 ntBASIC1.19□□□□□ -2.22
VTNP04004 SNORD38C-201ENST00000384381 69 ntBASIC1.19□□□□□ -2.22
VTNP04004 Y_RNA.508-201ENST00000384502 114 ntBASIC1.19□□□□□ -2.22
VTNP04004 MT-TT-201ENST00000387460 66 ntBASIC1.19□□□□□ -2.22
VTNP04004 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
VTNP04004 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.19□□□□□ -2.22
VTNP04004 RNU7-149P-201ENST00000516739 59 ntBASIC1.19□□□□□ -2.22
VTNP04004 RN7SKP88-201ENST00000516847 250 ntBASIC1.19□□□□□ -2.22
VTNP04004 SNORA18.7-201ENST00000516910 131 ntBASIC1.19□□□□□ -2.22
VTNP04004 AC004817.2-201ENST00000561794 651 ntBASIC1.19□□□□□ -2.22
VTNP04004 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
VTNP04004 MIR4282-201ENST00000583613 67 ntBASIC1.19□□□□□ -2.22
VTNP04004 7SK.8-201ENST00000612110 250 ntBASIC1.19□□□□□ -2.22
VTNP04004 7SK.11-201ENST00000615477 250 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms