Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 Y_RNA.562-201ENST00000384695 113 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 MIR518E-201ENST00000385252 88 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 U8.16-201ENST00000391279 133 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 Y_RNA.590-201ENST00000410140 107 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 MLLT10P1-201ENST00000418346 262 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 AC023449.1-201ENST00000454464 154 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 Y_RNA.650-201ENST00000459002 102 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 RPS23P4-201ENST00000487908 423 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.2□□□□□ -2.22
PRDM1O75626 RNU7-12P-201ENST00000516030 62 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 Y_RNA.679-201ENST00000516416 91 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 Y_RNA.777-201ENST00000516982 102 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 MIR4724-201ENST00000579485 89 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 AC087685.1-201ENST00000587507 141 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 Y_RNA.771-201ENST00000598668 102 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 Y_RNA.789-201ENST00000622480 102 ntBASIC1.2□□□□□ -2.22
PRDM1O75626 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
PRDM1O75626 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
PRDM1O75626 MIRLET7C-201ENST00000362160 84 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 MIR367-201ENST00000362299 68 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 RNU6-1084P-201ENST00000362498 107 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 Y_RNA.54-201ENST00000362766 105 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 Y_RNA.191-201ENST00000363972 113 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 Y_RNA.242-201ENST00000364473 110 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 Y_RNA.350-201ENST00000365409 98 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 RNU6-969P-201ENST00000383900 105 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 Y_RNA.416-201ENST00000384014 113 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 RNU6-211P-201ENST00000384047 107 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 RNU6-163P-201ENST00000384396 106 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 MIR522-201ENST00000385071 87 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 MIR891A-201ENST00000401237 79 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 AL603910.2-201ENST00000407268 136 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 AC093850.1-201ENST00000454121 251 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.19□□□□□ -2.22
PRDM1O75626 SNORD116-28-201ENST00000516123 91 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 RNU6-165P-201ENST00000517170 99 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 AC120024.3-201ENST00000603167 156 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 AL513534.2-201ENST00000603836 250 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 BX284668.6-201ENST00000606899 438 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 AL008718.3-201ENST00000610217 321 ntBASIC1.19□□□□□ -2.22
PRDM1O75626 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PRDM1O75626 Y_RNA.117-201ENST00000363294 101 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 RNU6-833P-201ENST00000363486 107 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 RNU6-1209P-201ENST00000363655 107 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 RNU4-38P-201ENST00000364472 129 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 snoU2-30.1-201ENST00000365012 70 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 MIR526A2-201ENST00000390198 65 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 RNA5SP496-201ENST00000391240 109 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 HMGN2P32-201ENST00000444648 269 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 SNORD2.1-201ENST00000458762 69 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.18□□□□□ -2.22
PRDM1O75626 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.18□□□□□ -2.22
PRDM1O75626 RNU6-947P-201ENST00000516264 106 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 MIR4452-201ENST00000583004 71 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 MIR4282-201ENST00000583613 67 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 Y_RNA.802-201ENST00000614892 130 ntBASIC1.18□□□□□ -2.22
PRDM1O75626 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
PRDM1O75626 RNU6-199P-201ENST00000362954 107 ntBASIC1.17□□□□□ -2.22
PRDM1O75626 Y_RNA.796-201ENST00000364268 102 ntBASIC1.17□□□□□ -2.22
PRDM1O75626 Y_RNA.799-201ENST00000364992 102 ntBASIC1.17□□□□□ -2.22
PRDM1O75626 SNORA8.3-201ENST00000384679 139 ntBASIC1.17□□□□□ -2.22
PRDM1O75626 MIR489-201ENST00000384923 84 ntBASIC1.17□□□□□ -2.22
PRDM1O75626 RPL23AP91-201ENST00000569211 455 ntBASIC1.17□□□□□ -2.22
PRDM1O75626 SNORA4-201ENST00000584302 138 ntBASIC1.17□□□□□ -2.22
PRDM1O75626 AC006006.1-201ENST00000603082 144 ntBASIC1.17□□□□□ -2.22
PRDM1O75626 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
PRDM1O75626 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
PRDM1O75626 Y_RNA.277-201ENST00000364754 102 ntBASIC1.16□□□□□ -2.22
PRDM1O75626 MIR520E-201ENST00000384867 87 ntBASIC1.16□□□□□ -2.22
PRDM1O75626 MIR222-201ENST00000384992 110 ntBASIC1.16□□□□□ -2.22
PRDM1O75626 MIR802-201ENST00000390235 94 ntBASIC1.16□□□□□ -2.22
PRDM1O75626 Y_RNA.618-201ENST00000410949 107 ntBASIC1.16□□□□□ -2.22
PRDM1O75626 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.16□□□□□ -2.22
PRDM1O75626 AC114811.1-201ENST00000507207 168 ntBASIC1.16□□□□□ -2.22
PRDM1O75626 SNORD45.4-201ENST00000516629 73 ntBASIC1.16□□□□□ -2.22
PRDM1O75626 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.16□□□□□ -2.22
PRDM1O75626 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.16□□□□□ -2.22
PRDM1O75626 Y_RNA.20-201ENST00000362479 113 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 SNORD14E-201ENST00000364009 85 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 Y_RNA.336-201ENST00000365307 109 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 Y_RNA.401-201ENST00000383965 117 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 RNU6-574P-201ENST00000384265 107 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 MIR452-201ENST00000385020 85 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.15□□□□□ -2.23
PRDM1O75626 PIGPP3-201ENST00000425307 415 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 RNU6-322P-201ENST00000516010 103 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 RNU6-1023P-201ENST00000516137 106 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 HSPE1P19-201ENST00000603327 295 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 AL022345.2-201ENST00000606307 135 ntBASIC1.15□□□□□ -2.23
PRDM1O75626 AL391516.1-201ENST00000554380 2449 ntBASIC1.14□□□□□ -2.23
PRDM1O75626 SNORD27-201ENST00000363981 72 ntBASIC1.14□□□□□ -2.23
PRDM1O75626 SNORA20.1-201ENST00000364790 130 ntBASIC1.14□□□□□ -2.23
PRDM1O75626 SNORD50B-201ENST00000364995 70 ntBASIC1.14□□□□□ -2.23
PRDM1O75626 Y_RNA.304-201ENST00000365011 112 ntBASIC1.14□□□□□ -2.23
PRDM1O75626 SNORA2.2-201ENST00000365473 135 ntBASIC1.14□□□□□ -2.23
PRDM1O75626 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
PRDM1O75626 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
PRDM1O75626 RNU6-383P-201ENST00000410864 94 ntBASIC1.14□□□□□ -2.23
PRDM1O75626 SNORD11-201ENST00000459124 84 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms