Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-780P-201ENST00000391030 104 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 SNORA75.6-201ENST00000391318 127 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 AL353997.1-201ENST00000432936 108 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 SNRPGP14-201ENST00000435400 219 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 SEPT7P4-201ENST00000437076 306 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.13□□□□□ -2.43
SHOX2O60902 RNU7-62P-201ENST00000458856 62 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.13□□□□□ -2.43
SHOX2O60902 SNORA18.4-201ENST00000516440 124 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 RPL23AP91-201ENST00000569211 455 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 MIR4441-201ENST00000582623 100 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 AC018462.2-201ENST00000605375 395 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 MIR3974-201ENST00000637126 96 ntBASIC-0.13□□□□□ -2.43
SHOX2O60902 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-364P-201ENST00000384387 107 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-747P-201ENST00000390928 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-241P-201ENST00000391148 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 MIR1285-2-201ENST00000408311 88 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 SNORD75.1-201ENST00000408373 60 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-447P-201ENST00000410293 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-355P-201ENST00000410427 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-791P-201ENST00000410467 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU2-59P-201ENST00000410482 191 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-705P-201ENST00000410601 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-860P-201ENST00000410860 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-785P-201ENST00000411324 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 MTCO2P27-201ENST00000420740 428 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.14□□□□□ -2.43
SHOX2O60902 MIR18B-201ENST00000454574 71 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.14□□□□□ -2.43
SHOX2O60902 RNA5SP461-201ENST00000516451 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 MIR4743-201ENST00000584576 69 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 U6.90-201ENST00000614007 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 U6.70-201ENST00000620287 104 ntBASIC-0.14□□□□□ -2.43
SHOX2O60902 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 RNU6-593P-201ENST00000364716 112 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 RNA5SP117-201ENST00000365294 118 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 RNA5SP128-201ENST00000365305 116 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 RNU6-710P-201ENST00000410424 105 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 AC011352.1-201ENST00000512300 793 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 RNU2-13P-201ENST00000515909 113 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.15□□□□□ -2.43
SHOX2O60902 AC018638.8-201ENST00000588755 281 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 AC090617.10-201ENST00000624308 134 ntBASIC-0.15□□□□□ -2.43
SHOX2O60902 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 RNU6-268P-201ENST00000364174 107 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
SHOX2O60902 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.16□□□□□ -2.44
SHOX2O60902 snoU13.16-201ENST00000459350 104 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 RNU7-181P-201ENST00000517234 74 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 MIR4790-201ENST00000577799 79 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 AC008608.1-201ENST00000603910 127 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 Z99129.1-201ENST00000612510 255 ntBASIC-0.16□□□□□ -2.44
SHOX2O60902 SNORA72.1-201ENST00000363485 129 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 RNU6-961P-201ENST00000363893 105 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 MIR125B2-201ENST00000385128 89 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 RNU7-102P-201ENST00000458948 62 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 RPL17P19-201ENST00000489069 552 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 RNA5SP268-201ENST00000516828 124 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.17□□□□□ -2.44
SHOX2O60902 AC245008.1-201ENST00000608123 476 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 MIR6755-201ENST00000619993 66 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 AC024614.3-201ENST00000637860 256 ntBASIC-0.17□□□□□ -2.44
SHOX2O60902 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 MTND1P1-201ENST00000445453 368 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 FCF1P4-201ENST00000448326 183 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 AC026782.1-201ENST00000512952 449 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 RNU6-436P-201ENST00000516171 114 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 AC109635.3-201ENST00000529536 185 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 MTND3P12-201ENST00000559068 328 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 AC055872.1-201ENST00000570978 278 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.18□□□□□ -2.44
SHOX2O60902 MIR5188-201ENST00000583467 113 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 AC005899.2-201ENST00000584353 90 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 SNORD92-201ENST00000585078 85 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 AC005176.2-201ENST00000596933 147 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 MIR6738-201ENST00000619620 64 ntBASIC-0.18□□□□□ -2.44
SHOX2O60902 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 RNU6-767P-201ENST00000384132 107 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 RNU6-831P-201ENST00000384548 107 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 MIR610-201ENST00000385139 96 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms