Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC006006.1-201ENST00000603082 144 ntBASIC1.21□□□□□ -2.22
SSX4O60224 AL096861.1-201ENST00000610899 123 ntBASIC1.21□□□□□ -2.22
SSX4O60224 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.21□□□□□ -2.22
SSX4O60224 Y_RNA.802-201ENST00000614892 130 ntBASIC1.21□□□□□ -2.22
SSX4O60224 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
SSX4O60224 MIR568-201ENST00000385036 95 ntBASIC1.2□□□□□ -2.22
SSX4O60224 MIR15B-201ENST00000385045 98 ntBASIC1.2□□□□□ -2.22
SSX4O60224 RNU6-1054P-201ENST00000411293 104 ntBASIC1.2□□□□□ -2.22
SSX4O60224 MTCYBP9-201ENST00000431021 303 ntBASIC1.2□□□□□ -2.22
SSX4O60224 SNORD2.1-201ENST00000458762 69 ntBASIC1.2□□□□□ -2.22
SSX4O60224 SNORA31.2-201ENST00000516019 134 ntBASIC1.2□□□□□ -2.22
SSX4O60224 AC012433.1-201ENST00000588916 398 ntBASIC1.2□□□□□ -2.22
SSX4O60224 AL049861.1-201ENST00000603130 150 ntBASIC1.2□□□□□ -2.22
SSX4O60224 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
SSX4O60224 uc_338.4-201ENST00000616635 176 ntBASIC1.2□□□□□ -2.22
SSX4O60224 Y_RNA.24-201ENST00000362508 103 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.82-201ENST00000363000 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.92-201ENST00000363043 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.122-201ENST00000363331 96 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.235-201ENST00000364412 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.306-201ENST00000365015 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.312-201ENST00000365089 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.322-201ENST00000365151 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.355-201ENST00000365462 98 ntBASIC1.19□□□□□ -2.22
SSX4O60224 SNORA8.3-201ENST00000384679 139 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.590-201ENST00000410140 107 ntBASIC1.19□□□□□ -2.22
SSX4O60224 RNU2-38P-201ENST00000410856 79 ntBASIC1.19□□□□□ -2.22
SSX4O60224 AC245047.8-201ENST00000456455 284 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.650-201ENST00000459002 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 SNORD123-201ENST00000459473 70 ntBASIC1.19□□□□□ -2.22
SSX4O60224 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.19□□□□□ -2.22
SSX4O60224 RNU7-149P-201ENST00000516739 59 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.777-201ENST00000516982 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.19□□□□□ -2.22
SSX4O60224 AC019288.1-201ENST00000557918 224 ntBASIC1.19□□□□□ -2.22
SSX4O60224 MIR3192-201ENST00000584920 77 ntBASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.771-201ENST00000598668 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SSX4O60224 Y_RNA.789-201ENST00000622480 102 ntBASIC1.19□□□□□ -2.22
SSX4O60224 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.19□□□□□ -2.22
SSX4O60224 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SSX4O60224 U8.1-201ENST00000362843 134 ntBASIC1.18□□□□□ -2.22
SSX4O60224 Y_RNA.242-201ENST00000364473 110 ntBASIC1.18□□□□□ -2.22
SSX4O60224 Y_RNA.288-201ENST00000364854 92 ntBASIC1.18□□□□□ -2.22
SSX4O60224 Y_RNA.572-201ENST00000384757 98 ntBASIC1.18□□□□□ -2.22
SSX4O60224 MIR520C-201ENST00000385005 87 ntBASIC1.18□□□□□ -2.22
SSX4O60224 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
SSX4O60224 MIR1276-201ENST00000408707 83 ntBASIC1.18□□□□□ -2.22
SSX4O60224 AC245047.7-201ENST00000440265 293 ntBASIC1.18□□□□□ -2.22
SSX4O60224 AL118496.2-201ENST00000448300 230 ntBASIC1.18□□□□□ -2.22
SSX4O60224 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.18□□□□□ -2.22
SSX4O60224 SNORD127-201ENST00000458892 86 ntBASIC1.18□□□□□ -2.22
SSX4O60224 Y_RNA.679-201ENST00000516416 91 ntBASIC1.18□□□□□ -2.22
SSX4O60224 MIR5688-201ENST00000580619 83 ntBASIC1.18□□□□□ -2.22
SSX4O60224 AC006441.5-201ENST00000612680 209 ntBASIC1.18□□□□□ -2.22
SSX4O60224 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.17□□□□□ -2.22
SSX4O60224 Y_RNA.116-201ENST00000363292 103 ntBASIC1.17□□□□□ -2.22
SSX4O60224 Y_RNA.352-201ENST00000365439 102 ntBASIC1.17□□□□□ -2.22
SSX4O60224 MIR626-201ENST00000385032 94 ntBASIC1.17□□□□□ -2.22
SSX4O60224 MIR518E-201ENST00000385252 88 ntBASIC1.17□□□□□ -2.22
SSX4O60224 snoU13.25-201ENST00000458945 104 ntBASIC1.17□□□□□ -2.22
SSX4O60224 AL133373.1-201ENST00000497098 94 ntBASIC1.17□□□□□ -2.22
SSX4O60224 SNORA31.4-201ENST00000516049 129 ntBASIC1.17□□□□□ -2.22
SSX4O60224 RN7SKP164-201ENST00000516138 266 ntBASIC1.17□□□□□ -2.22
SSX4O60224 AC100767.1-201ENST00000528178 123 ntBASIC1.17□□□□□ -2.22
SSX4O60224 MIR4764-201ENST00000580680 88 ntBASIC1.17□□□□□ -2.22
SSX4O60224 MIR6504-201ENST00000613520 61 ntBASIC1.17□□□□□ -2.22
SSX4O60224 Pinc.1-201ENST00000616452 154 ntBASIC1.17□□□□□ -2.22
SSX4O60224 Y_RNA.54-201ENST00000362766 105 ntBASIC1.16□□□□□ -2.22
SSX4O60224 Y_RNA.277-201ENST00000364754 102 ntBASIC1.16□□□□□ -2.22
SSX4O60224 SNORA25-201ENST00000384384 134 ntBASIC1.16□□□□□ -2.22
SSX4O60224 RNU6-910P-201ENST00000390844 107 ntBASIC1.16□□□□□ -2.22
SSX4O60224 Y_RNA.587-201ENST00000391210 103 ntBASIC1.16□□□□□ -2.22
SSX4O60224 MIR1302-3-201ENST00000408128 138 ntBASIC1.16□□□□□ -2.22
SSX4O60224 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
SSX4O60224 RNU7-41P-201ENST00000515917 61 ntBASIC1.16□□□□□ -2.22
SSX4O60224 RNU6-830P-201ENST00000516353 107 ntBASIC1.16□□□□□ -2.22
SSX4O60224 RNU7-43P-201ENST00000516554 64 ntBASIC1.16□□□□□ -2.22
SSX4O60224 MIR4643-201ENST00000577473 78 ntBASIC1.16□□□□□ -2.22
SSX4O60224 MIR4282-201ENST00000583613 67 ntBASIC1.16□□□□□ -2.22
SSX4O60224 AL022345.2-201ENST00000606307 135 ntBASIC1.16□□□□□ -2.22
SSX4O60224 AC015726.2-201ENST00000620112 122 ntBASIC1.16□□□□□ -2.22
SSX4O60224 Y_RNA.229-201ENST00000364347 113 ntBASIC1.15□□□□□ -2.23
SSX4O60224 RNU6-1138P-201ENST00000365359 106 ntBASIC1.15□□□□□ -2.23
SSX4O60224 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
SSX4O60224 Y_RNA.556-201ENST00000384677 113 ntBASIC1.15□□□□□ -2.23
SSX4O60224 MTND3P2-201ENST00000438452 342 ntBASIC1.15□□□□□ -2.23
SSX4O60224 SNORD77.4-201ENST00000516158 81 ntBASIC1.15□□□□□ -2.23
SSX4O60224 RNA5SP102-201ENST00000516865 106 ntBASIC1.15□□□□□ -2.23
SSX4O60224 SNORA70.22-201ENST00000517160 124 ntBASIC1.15□□□□□ -2.23
SSX4O60224 MIR548AR-201ENST00000582191 57 ntBASIC1.15□□□□□ -2.23
SSX4O60224 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.15□□□□□ -2.23
SSX4O60224 AL391903.3-201ENST00000612158 163 ntBASIC1.15□□□□□ -2.23
SSX4O60224 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
SSX4O60224 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
SSX4O60224 RNU6-53P-201ENST00000365367 106 ntBASIC1.14□□□□□ -2.23
SSX4O60224 Y_RNA.363-201ENST00000365529 113 ntBASIC1.14□□□□□ -2.23
SSX4O60224 SNORD28B-201ENST00000390993 75 ntBASIC1.14□□□□□ -2.23
SSX4O60224 U8.17-201ENST00000391292 132 ntBASIC1.14□□□□□ -2.23
SSX4O60224 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms