Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR136-201ENST00000385207 82 ntBASIC1.17□□□□□ -2.22
O00370 MIR653-201ENST00000385279 96 ntBASIC1.17□□□□□ -2.22
O00370 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.17□□□□□ -2.22
O00370 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.17□□□□□ -2.22
O00370 AL118496.2-201ENST00000448300 230 ntBASIC1.17□□□□□ -2.22
O00370 Y_RNA.641-201ENST00000459414 105 ntBASIC1.17□□□□□ -2.22
O00370 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.17□□□□□ -2.22
O00370 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.17□□□□□ -2.22
O00370 AL353621.2-201ENST00000605340 133 ntBASIC1.17□□□□□ -2.22
O00370 U2.14-201ENST00000615943 113 ntBASIC1.17□□□□□ -2.22
O00370 AC015726.2-201ENST00000620112 122 ntBASIC1.17□□□□□ -2.22
O00370 AC099654.10-201ENST00000640395 161 ntBASIC1.17□□□□□ -2.22
O00370 MIR96-201ENST00000362288 78 ntBASIC1.16□□□□□ -2.22
O00370 RNU6-674P-201ENST00000363831 107 ntBASIC1.16□□□□□ -2.22
O00370 Y_RNA.191-201ENST00000363972 113 ntBASIC1.16□□□□□ -2.22
O00370 SNORD38C-201ENST00000384381 69 ntBASIC1.16□□□□□ -2.22
O00370 Y_RNA.590-201ENST00000410140 107 ntBASIC1.16□□□□□ -2.22
O00370 RNU2-38P-201ENST00000410856 79 ntBASIC1.16□□□□□ -2.22
O00370 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
O00370 SNORA31.2-201ENST00000516019 134 ntBASIC1.16□□□□□ -2.22
O00370 MIR4452-201ENST00000583004 71 ntBASIC1.16□□□□□ -2.22
O00370 AL357312.1-201ENST00000603879 298 ntBASIC1.16□□□□□ -2.22
O00370 SNORD114-22-201ENST00000365423 72 ntBASIC1.15□□□□□ -2.23
O00370 RNU6-969P-201ENST00000383900 105 ntBASIC1.15□□□□□ -2.23
O00370 RNU6-144P-201ENST00000383951 107 ntBASIC1.15□□□□□ -2.23
O00370 MIR489-201ENST00000384923 84 ntBASIC1.15□□□□□ -2.23
O00370 RNU6-651P-201ENST00000411040 105 ntBASIC1.15□□□□□ -2.23
O00370 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
O00370 SNORD11-201ENST00000459124 84 ntBASIC1.15□□□□□ -2.23
O00370 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
O00370 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
O00370 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.15□□□□□ -2.23
O00370 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.15□□□□□ -2.23
O00370 BX284668.6-201ENST00000606899 438 ntBASIC1.15□□□□□ -2.23
O00370 Y_RNA.802-201ENST00000614892 130 ntBASIC1.15□□□□□ -2.23
O00370 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
O00370 Y_RNA.24-201ENST00000362508 103 ntBASIC1.14□□□□□ -2.23
O00370 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
O00370 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
O00370 Y_RNA.572-201ENST00000384757 98 ntBASIC1.14□□□□□ -2.23
O00370 AL358176.2-201ENST00000425769 204 ntBASIC1.14□□□□□ -2.23
O00370 COX6CP14-201ENST00000469580 174 ntBASIC1.14□□□□□ -2.23
O00370 RNU6-1045P-201ENST00000516321 107 ntBASIC1.14□□□□□ -2.23
O00370 RNU6-1007P-201ENST00000516586 107 ntBASIC1.14□□□□□ -2.23
O00370 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.14□□□□□ -2.23
O00370 SNORA4-201ENST00000584302 138 ntBASIC1.14□□□□□ -2.23
O00370 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
O00370 MIR4719-201ENST00000585233 84 ntBASIC1.14□□□□□ -2.23
O00370 AC008507.4-201ENST00000585464 127 ntBASIC1.14□□□□□ -2.23
O00370 AC087685.1-201ENST00000587507 141 ntBASIC1.14□□□□□ -2.23
O00370 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
O00370 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
O00370 UBE2WP1-201ENST00000362030 340 ntBASIC1.13□□□□□ -2.23
O00370 Y_RNA.288-201ENST00000364854 92 ntBASIC1.13□□□□□ -2.23
O00370 RNU6-472P-201ENST00000384299 107 ntBASIC1.13□□□□□ -2.23
O00370 MIR520C-201ENST00000385005 87 ntBASIC1.13□□□□□ -2.23
O00370 Y_RNA.587-201ENST00000391210 103 ntBASIC1.13□□□□□ -2.23
O00370 MIR1302-3-201ENST00000408128 138 ntBASIC1.13□□□□□ -2.23
O00370 AL096861.1-201ENST00000610899 123 ntBASIC1.13□□□□□ -2.23
O00370 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.13□□□□□ -2.23
O00370 Y_RNA.277-201ENST00000364754 102 ntBASIC1.12□□□□□ -2.23
O00370 SNORA8.3-201ENST00000384679 139 ntBASIC1.12□□□□□ -2.23
O00370 MIR15B-201ENST00000385045 98 ntBASIC1.12□□□□□ -2.23
O00370 RNU6-910P-201ENST00000390844 107 ntBASIC1.12□□□□□ -2.23
O00370 snoU13.18-201ENST00000459483 104 ntBASIC1.12□□□□□ -2.23
O00370 RNU7-149P-201ENST00000516739 59 ntBASIC1.12□□□□□ -2.23
O00370 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.12□□□□□ -2.23
O00370 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
O00370 AC012433.1-201ENST00000588916 398 ntBASIC1.12□□□□□ -2.23
O00370 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
O00370 SNORD114-21-201ENST00000606412 72 ntBASIC1.12□□□□□ -2.23
O00370 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
O00370 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
O00370 SNORA25.3-201ENST00000363205 127 ntBASIC1.11□□□□□ -2.23
O00370 SNORD27-201ENST00000363981 72 ntBASIC1.11□□□□□ -2.23
O00370 SNORA70.7-201ENST00000384159 133 ntBASIC1.11□□□□□ -2.23
O00370 Y_RNA.477-201ENST00000384352 108 ntBASIC1.11□□□□□ -2.23
O00370 MIR570-201ENST00000384917 97 ntBASIC1.11□□□□□ -2.23
O00370 AL603910.2-201ENST00000407268 136 ntBASIC1.11□□□□□ -2.23
O00370 SNORD123-201ENST00000459473 70 ntBASIC1.11□□□□□ -2.23
O00370 uc_338.4-201ENST00000616635 176 ntBASIC1.11□□□□□ -2.23
O00370 MIR335-201ENST00000362173 94 ntBASIC1.1□□□□□ -2.23
O00370 RNU6-268P-201ENST00000364174 107 ntBASIC1.1□□□□□ -2.23
O00370 SNORA22-201ENST00000383907 134 ntBASIC1.1□□□□□ -2.23
O00370 SNORA22C-201ENST00000384614 134 ntBASIC1.1□□□□□ -2.23
O00370 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
O00370 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.1□□□□□ -2.23
O00370 MTCYBP9-201ENST00000431021 303 ntBASIC1.1□□□□□ -2.23
O00370 AC245047.8-201ENST00000456455 284 ntBASIC1.1□□□□□ -2.23
O00370 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
O00370 MTCO2P24-201ENST00000515611 426 ntBASIC1.1□□□□□ -2.23
O00370 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
O00370 SNORA74.3-201ENST00000517108 154 ntBASIC1.1□□□□□ -2.23
O00370 SNORA70.22-201ENST00000517160 124 ntBASIC1.1□□□□□ -2.23
O00370 RNU7-181P-201ENST00000517234 74 ntBASIC1.1□□□□□ -2.23
O00370 MIR3192-201ENST00000584920 77 ntBASIC1.1□□□□□ -2.23
O00370 Pinc.1-201ENST00000616452 154 ntBASIC1.1□□□□□ -2.23
O00370 AC245047.7-201ENST00000440265 293 ntBASIC1.09□□□□□ -2.23
O00370 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.09□□□□□ -2.23
O00370 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms