Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC087685.1-201ENST00000587507 141 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
UBQLN3Q9H347 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UBQLN3Q9H347 SNORA25.1-201ENST00000362326 128 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 RNU6-1205P-201ENST00000363625 106 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 RNU6-674P-201ENST00000363831 107 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 Y_RNA.541-201ENST00000384640 113 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 RPL21P38-201ENST00000418090 167 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 MRPL35P3-201ENST00000421557 364 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 AC063976.4-201ENST00000421971 163 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 SNORD123-201ENST00000459473 70 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 RPS23P4-201ENST00000487908 423 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 SNORD79.1-201ENST00000516069 84 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 RNA5SP102-201ENST00000516865 106 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 RNU6-1137P-201ENST00000517073 99 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.01□□□□□ -2.25
UBQLN3Q9H347 MIR4764-201ENST00000580680 88 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 AC044792.1-201ENST00000593294 196 ntBASIC1.01□□□□□ -2.25
UBQLN3Q9H347 AC008163.1-202ENST00000636004 2889 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 Y_RNA.64-201ENST00000362845 102 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 snoU2_19.2-201ENST00000363024 80 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 AC002429.1-201ENST00000437672 148 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 AC245047.8-201ENST00000456455 284 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 COX6CP14-201ENST00000469580 174 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 UBL5P1-201ENST00000507979 193 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 RNU7-41P-201ENST00000515917 61 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 AL391903.3-201ENST00000612158 163 ntBASIC1□□□□□ -2.25
UBQLN3Q9H347 Y_RNA.26-201ENST00000362539 101 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 SNORA25.3-201ENST00000363205 127 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 Y_RNA.276-201ENST00000364732 109 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 RNU6-1227P-201ENST00000383981 107 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 RNU6-639P-201ENST00000384074 107 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 SNORD12-201ENST00000391002 90 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 AC005534.2-201ENST00000431047 433 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.99□□□□□ -2.25
UBQLN3Q9H347 MTND4LP30-201ENST00000454092 297 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 snoU13.25-201ENST00000458945 104 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 RNU6-1143P-201ENST00000516125 104 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 RNU6-1007P-201ENST00000516586 107 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.99□□□□□ -2.25
UBQLN3Q9H347 AP003733.2-201ENST00000529409 171 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.99□□□□□ -2.25
UBQLN3Q9H347 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 AC008507.4-201ENST00000585464 127 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 PRELID3BP2-201ENST00000605362 201 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 AC022140.2-201ENST00000623500 188 ntBASIC0.99□□□□□ -2.25
UBQLN3Q9H347 Y_RNA.153-201ENST00000363615 91 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 SNORA25.9-201ENST00000365087 128 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 SNORA33.2-201ENST00000365413 134 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 RNU6-326P-201ENST00000365480 107 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 RNU6-144P-201ENST00000383951 107 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 RNU6-662P-201ENST00000384253 104 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 SNORD72-201ENST00000390994 80 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 AC023449.1-201ENST00000454464 154 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 Y_RNA.637-201ENST00000459424 114 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 AC091959.1-201ENST00000495857 238 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
UBQLN3Q9H347 RNU7-43P-201ENST00000516554 64 ntBASIC0.98□□□□□ -2.25
UBQLN3Q9H347 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
UBQLN3Q9H347 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.98□□□□□ -2.25
UBQLN3Q9H347 MIR103A2-201ENST00000362154 78 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 RNA5SP264-201ENST00000363115 107 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 RNU6-268P-201ENST00000364174 107 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 Y_RNA.293-201ENST00000364908 93 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 Y_RNA.330-201ENST00000365230 109 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 MIR499A-201ENST00000384903 122 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 SNORA75.2-201ENST00000391138 150 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 SNORA75.3-201ENST00000391231 150 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 MIR1287-201ENST00000408492 90 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 RNU6-383P-201ENST00000410864 94 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 BTF3P11-201ENST00000426582 477 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.97□□□□□ -2.25
UBQLN3Q9H347 SNORD11-201ENST00000459124 84 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 RPS26P48-201ENST00000491713 339 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.97□□□□□ -2.25
UBQLN3Q9H347 MIR6504-201ENST00000613520 61 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 Pinc.1-201ENST00000616452 154 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 AC013791.1-201ENST00000616619 62 ntBASIC0.97□□□□□ -2.25
UBQLN3Q9H347 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 MIR96-201ENST00000362288 78 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 Y_RNA.14-201ENST00000362415 103 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 Y_RNA.16-201ENST00000362421 102 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 RNU6-1272P-201ENST00000362776 107 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 RNU6-985P-201ENST00000410182 104 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 RNU7-21P-201ENST00000459430 62 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
UBQLN3Q9H347 Y_RNA.673-201ENST00000516306 88 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 SCARNA24.2-201ENST00000516968 130 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 AP003072.1-201ENST00000531740 145 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.96□□□□□ -2.26
UBQLN3Q9H347 MIR5692C2-201ENST00000577959 77 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 MIR548AR-201ENST00000582191 57 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms