Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 AC127455.1-201ENST00000565496 145 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 AC087685.1-201ENST00000587507 141 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 Y_RNA.772-201ENST00000606692 102 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 AC084781.2-201ENST00000615568 161 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 AC010487.4-201ENST00000637027 61 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 MIR1302-1-201ENST00000637932 143 ntBASIC0.47□□□□□ -2.33
CDKL3Q8IVW4 RNU6-1209P-201ENST00000363655 107 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 SNORD113.3-201ENST00000364630 78 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 RNU6-442P-201ENST00000383968 104 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.462-201ENST00000384268 102 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 MIR570-201ENST00000384917 97 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 AC244098.3-201ENST00000424803 96 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 AC005534.2-201ENST00000431047 433 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 NDUFA4P2-201ENST00000489989 244 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 RNU7-115P-201ENST00000516433 55 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 RNU7-110P-201ENST00000516891 62 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 MIR1273G-201ENST00000577677 100 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 MIR3145-201ENST00000580727 82 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 AC011373.1-201ENST00000607270 237 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 AL136317.1-201ENST00000612653 226 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 MIR548AY-201ENST00000617669 107 ntBASIC0.46□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.390-201ENST00000383932 102 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.458-201ENST00000384240 102 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 RBMX2P4-201ENST00000441256 376 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 snoU13.21-201ENST00000459368 105 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 AC012433.1-201ENST00000588916 398 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 AC092447.9-201ENST00000603395 144 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 AL132765.2-201ENST00000610812 351 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 Pinc.1-201ENST00000616452 154 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 AC104985.2-201ENST00000620598 500 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 AC091925.1-201ENST00000623204 462 ntBASIC0.45□□□□□ -2.34
CDKL3Q8IVW4 RNU6-1115P-201ENST00000362490 106 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 RNU6-268P-201ENST00000364174 107 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.496-201ENST00000384444 101 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 SNORA2B-201ENST00000384583 137 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 RNU4-30P-201ENST00000410245 143 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 MTND1P14-201ENST00000427400 950 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 HMGN1P10-201ENST00000474557 553 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.661-201ENST00000516003 99 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 RNU6-830P-201ENST00000516353 107 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 MIR5188-201ENST00000583467 113 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 UBE2V2P2-201ENST00000587677 504 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 RPS29P30-201ENST00000600975 111 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 AL121655.1-201ENST00000605811 308 ntBASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
CDKL3Q8IVW4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.39-201ENST00000362620 98 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.187-201ENST00000363918 113 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.551-201ENST00000384661 102 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 U8.17-201ENST00000391292 132 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 MIR1827-201ENST00000408549 66 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 MIR1278-201ENST00000408753 81 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 RNU6-613P-201ENST00000410412 108 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.632-201ENST00000459189 102 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 MIR2115-201ENST00000516657 100 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 RNU4-77P-201ENST00000516692 156 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 AL355375.2-201ENST00000574825 175 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 AC011195.1-201ENST00000578177 177 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 MIR4300-201ENST00000581016 96 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 AC008507.4-201ENST00000585464 127 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 AL080274.1-201ENST00000605565 220 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 AL138825.1-201ENST00000618587 192 ntBASIC0.43□□□□□ -2.34
CDKL3Q8IVW4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 SNORD63-201ENST00000384262 68 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 RNU6-937P-201ENST00000384325 106 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 SNORA51.10-201ENST00000384418 136 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 RNU6-21P-201ENST00000384710 107 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 SNORD105-201ENST00000386910 85 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 RNU1-119P-201ENST00000391122 165 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 MTCO2P33-201ENST00000402100 465 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 SNORA36B-201ENST00000410438 131 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 AL160004.2-201ENST00000432935 350 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 RNU7-152P-201ENST00000458982 64 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 RNU6-437P-201ENST00000459408 95 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 RNU7-181P-201ENST00000517234 74 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 RPL23AP91-201ENST00000569211 455 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 MIR2681-201ENST00000581814 105 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 AC015726.2-201ENST00000620112 122 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
CDKL3Q8IVW4 MIR1-1-201ENST00000362147 71 ntBASIC0.41□□□□□ -2.34
CDKL3Q8IVW4 Y_RNA.143-201ENST00000363520 106 ntBASIC0.41□□□□□ -2.34
CDKL3Q8IVW4 SNORD45.3-201ENST00000363836 72 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms