Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC108706.1-201ENST00000611053 297 ntBASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.93□□□□□ -2.26
SHROOM1Q2M3G4 RNU6-1209P-201ENST00000363655 107 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 RNU5E-4P-201ENST00000364931 120 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 RNU6-867P-201ENST00000364956 107 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.330-201ENST00000365230 109 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.395-201ENST00000383945 109 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 RNU7-141P-201ENST00000459304 62 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 SEPT14P8-201ENST00000508026 178 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 AP003357.1-201ENST00000604497 148 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 JPX_2.1-201ENST00000614161 69 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 MIR376A1-201ENST00000616574 68 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 MIR548AY-201ENST00000617669 107 ntBASIC0.92□□□□□ -2.26
SHROOM1Q2M3G4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 RNU6-801P-201ENST00000364087 105 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.389-201ENST00000383924 113 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 SNORA80D-201ENST00000384488 135 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 RNU6-823P-201ENST00000391042 103 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 MTCO2P33-201ENST00000402100 465 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 RNU7-116P-201ENST00000516940 62 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.713-201ENST00000517013 96 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 SNORA74.3-201ENST00000517108 154 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 AC127455.1-201ENST00000565496 145 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 MIR4300-201ENST00000581016 96 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 C8orf59P2-201ENST00000603441 271 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 RAC1P9-201ENST00000604990 392 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 SNORD113-5-201ENST00000607261 78 ntBASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.91□□□□□ -2.26
SHROOM1Q2M3G4 Y_RNA.105-201ENST00000363182 111 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 SNORD14E-201ENST00000364009 85 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.216-201ENST00000364205 93 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 AC117470.1-201ENST00000381974 330 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-969P-201ENST00000383900 105 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.431-201ENST00000384086 102 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 SNORA26.5-201ENST00000391215 123 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 SNORA36B-201ENST00000410438 131 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 AC004941.2-201ENST00000427009 228 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 AC245047.8-201ENST00000456455 284 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.639-201ENST00000458981 102 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-475P-201ENST00000516073 104 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.714-201ENST00000517065 90 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.715-201ENST00000517082 110 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-897P-201ENST00000517135 105 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 MIR4764-201ENST00000580680 88 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 PRELID3BP2-201ENST00000605362 201 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 AL020996.3-201ENST00000606617 222 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 AL391903.3-201ENST00000612158 163 ntBASIC0.9□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.138-201ENST00000363462 102 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.418-201ENST00000384029 102 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 MIR570-201ENST00000384917 97 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 MIR802-201ENST00000390235 94 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 SNORD123-201ENST00000459473 70 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 AC098869.1-201ENST00000481627 292 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 NDUFA4P2-201ENST00000489989 244 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 MRPS35P2-201ENST00000508242 191 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 RPL23AP91-201ENST00000569211 455 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 AC023827.1-201ENST00000569247 97 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 RN7SL793P-201ENST00000583259 296 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 AL160413.1-201ENST00000622780 310 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 AC090574.1-201ENST00000623186 233 ntBASIC0.89□□□□□ -2.27
SHROOM1Q2M3G4 MIR103A2-201ENST00000362154 78 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 RNA5SP264-201ENST00000363115 107 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 RNA5SP325-201ENST00000363756 130 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 SNORA72.4-201ENST00000384174 132 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 MIR508-201ENST00000384857 115 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 SNORD28B-201ENST00000390993 75 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-101P-201ENST00000410323 104 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 HSPE1P25-201ENST00000455484 251 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 RNU7-21P-201ENST00000459430 62 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-191P-201ENST00000516295 94 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 AC136628.3-201ENST00000521868 290 ntBASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.88□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.28-201ENST00000362554 111 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 SNORA22B-201ENST00000383876 138 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 SNORD72-201ENST00000390994 80 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 MIR942-201ENST00000401111 86 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 HMGN2P32-201ENST00000444648 269 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-437P-201ENST00000459408 95 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 ACA64.5-201ENST00000516207 127 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-764P-201ENST00000516396 105 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 AC004812.1-201ENST00000540773 146 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 MIR548AR-201ENST00000582191 57 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 AC005357.1-201ENST00000588399 301 ntBASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-806P-201ENST00000365147 105 ntBASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.527-201ENST00000384573 102 ntBASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 RNU6-121P-201ENST00000410525 99 ntBASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 U8.19-201ENST00000459095 133 ntBASIC0.86□□□□□ -2.27
SHROOM1Q2M3G4 Y_RNA.631-201ENST00000459607 101 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 281 ms