Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 Y_RNA.293-201ENST00000364908 93 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 MIR526A2-201ENST00000390198 65 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 MIR1278-201ENST00000408753 81 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 AC245047.7-201ENST00000440265 293 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.34□□□□□ -2.19
ABCD3P28288 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 RNU7-43P-201ENST00000516554 64 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 snoU18.1-201ENST00000629629 71 ntBASIC1.34□□□□□ -2.19
ABCD3P28288 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
ABCD3P28288 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
ABCD3P28288 Y_RNA.237-201ENST00000364439 102 ntBASIC1.33□□□□□ -2.2
ABCD3P28288 Y_RNA.461-201ENST00000384263 103 ntBASIC1.33□□□□□ -2.2
ABCD3P28288 Y_RNA.518-201ENST00000384552 113 ntBASIC1.33□□□□□ -2.2
ABCD3P28288 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.33□□□□□ -2.2
ABCD3P28288 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
ABCD3P28288 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCD3P28288 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCD3P28288 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
ABCD3P28288 AC136443.5-201ENST00000603741 370 ntBASIC1.33□□□□□ -2.2
ABCD3P28288 AL008718.3-201ENST00000610217 321 ntBASIC1.33□□□□□ -2.2
ABCD3P28288 U2.14-201ENST00000615943 113 ntBASIC1.33□□□□□ -2.2
ABCD3P28288 Y_RNA.149-201ENST00000363558 117 ntBASIC1.32□□□□□ -2.2
ABCD3P28288 Y_RNA.459-201ENST00000384251 102 ntBASIC1.32□□□□□ -2.2
ABCD3P28288 RNU6-1289P-201ENST00000384431 106 ntBASIC1.32□□□□□ -2.2
ABCD3P28288 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCD3P28288 RNU6-830P-201ENST00000516353 107 ntBASIC1.32□□□□□ -2.2
ABCD3P28288 AL021707.8-201ENST00000609428 183 ntBASIC1.32□□□□□ -2.2
ABCD3P28288 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
ABCD3P28288 Y_RNA.802-201ENST00000614892 130 ntBASIC1.32□□□□□ -2.2
ABCD3P28288 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
ABCD3P28288 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
ABCD3P28288 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
ABCD3P28288 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 RNY1P10-201ENST00000363268 113 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 Y_RNA.512-201ENST00000384518 102 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 MIR520C-201ENST00000385005 87 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCD3P28288 SNRPGP14-201ENST00000435400 219 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 AC048334.1-201ENST00000477975 159 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 SNORA18.7-201ENST00000516910 131 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 SNORA70.22-201ENST00000517160 124 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 MIR4781-201ENST00000585250 76 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 AL022345.2-201ENST00000606307 135 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 AL096861.1-201ENST00000610899 123 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 AC006441.5-201ENST00000612680 209 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 uc_338.4-201ENST00000616635 176 ntBASIC1.31□□□□□ -2.2
ABCD3P28288 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
ABCD3P28288 RNU6-268P-201ENST00000364174 107 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 RNU6-211P-201ENST00000384047 107 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
ABCD3P28288 SNORD72-201ENST00000390994 80 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 SNORD12-201ENST00000391002 90 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 RNU6-383P-201ENST00000410864 94 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 SNORD123-201ENST00000459473 70 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.3□□□□□ -2.2
ABCD3P28288 AC006006.1-201ENST00000603082 144 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 AL360085.1-201ENST00000604713 532 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCD3P28288 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
ABCD3P28288 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.82-201ENST00000363000 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.92-201ENST00000363043 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.235-201ENST00000364412 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.306-201ENST00000365015 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.312-201ENST00000365089 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.322-201ENST00000365151 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 SNORA8.3-201ENST00000384679 139 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.650-201ENST00000459002 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 AL133373.1-201ENST00000497098 94 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 RNU6-126P-201ENST00000516685 103 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.777-201ENST00000516982 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 DNAJC19P9-201ENST00000555084 351 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 MIR4662B-201ENST00000579498 81 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 MIR4764-201ENST00000580680 88 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.771-201ENST00000598668 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 BX284668.6-201ENST00000606899 438 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 AL391903.3-201ENST00000612158 163 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Pinc.1-201ENST00000616452 154 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 Y_RNA.789-201ENST00000622480 102 ntBASIC1.29□□□□□ -2.2
ABCD3P28288 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ABCD3P28288 RNA5SP48-201ENST00000363969 126 ntBASIC1.28□□□□□ -2.2
ABCD3P28288 RNU6-1138P-201ENST00000365359 106 ntBASIC1.28□□□□□ -2.2
ABCD3P28288 Y_RNA.483-201ENST00000384380 101 ntBASIC1.28□□□□□ -2.2
ABCD3P28288 AL603910.2-201ENST00000407268 136 ntBASIC1.28□□□□□ -2.2
ABCD3P28288 AL358176.2-201ENST00000425769 204 ntBASIC1.28□□□□□ -2.2
ABCD3P28288 AC245047.8-201ENST00000456455 284 ntBASIC1.28□□□□□ -2.2
ABCD3P28288 AL160236.1-201ENST00000556317 195 ntBASIC1.28□□□□□ -2.2
ABCD3P28288 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.28□□□□□ -2.2
ABCD3P28288 AC027335.2-201ENST00000624030 375 ntBASIC1.28□□□□□ -2.2
ABCD3P28288 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms