Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNA5SP395-201ENST00000516567 118 ntBASIC-0.34□□□□□ -2.46
HLA-DMBP28068 RNU6-782P-201ENST00000516852 104 ntBASIC-0.34□□□□□ -2.46
HLA-DMBP28068 RNU7-116P-201ENST00000516940 62 ntBASIC-0.34□□□□□ -2.46
HLA-DMBP28068 RNU1-54P-201ENST00000517181 120 ntBASIC-0.34□□□□□ -2.46
HLA-DMBP28068 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.34□□□□□ -2.46
HLA-DMBP28068 MIR4645-201ENST00000583158 77 ntBASIC-0.34□□□□□ -2.46
HLA-DMBP28068 AP001180.6-201ENST00000584918 159 ntBASIC-0.34□□□□□ -2.46
HLA-DMBP28068 NBR2-204ENST00000587322 63 ntBASIC-0.34□□□□□ -2.46
HLA-DMBP28068 MTND5P26-201ENST00000426018 1752 ntBASIC-0.34□□□□□ -2.46
HLA-DMBP28068 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 SNORA2A-201ENST00000383885 135 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 RNU6-767P-201ENST00000384132 107 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 MIR588-201ENST00000384900 83 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 MIR563-201ENST00000385080 79 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 MIR760-201ENST00000390220 80 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.35□□□□□ -2.47
HLA-DMBP28068 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 RNU6-469P-201ENST00000516253 101 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 RNU6-864P-201ENST00000516256 108 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.35□□□□□ -2.47
HLA-DMBP28068 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.35□□□□□ -2.47
HLA-DMBP28068 JPX_2.1-201ENST00000614161 69 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 AC022306.2-201ENST00000617563 647 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 AC124864.2-201ENST00000624736 186 ntBASIC-0.35□□□□□ -2.47
HLA-DMBP28068 RNU6-451P-201ENST00000362921 107 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 SNORD114-28-201ENST00000363610 72 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 RNY3P3-201ENST00000363816 102 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 RNU6-187P-201ENST00000384139 106 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 RNU6-601P-201ENST00000384540 107 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 SNORD38B-201ENST00000384690 67 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 MIR518F-201ENST00000384973 87 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 RNU6-269P-201ENST00000391077 97 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 RNU6-332P-201ENST00000391193 108 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.36□□□□□ -2.47
HLA-DMBP28068 snoU13.2-201ENST00000459201 104 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 MIR2355-201ENST00000517199 87 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 MIR5188-201ENST00000583467 113 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 AC134878.1-201ENST00000619901 243 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 Z97988.1-201ENST00000637697 135 ntBASIC-0.36□□□□□ -2.47
HLA-DMBP28068 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 MT-TF-201ENST00000387314 71 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 AL603910.2-201ENST00000407268 136 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 AC236972.2-201ENST00000434979 310 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 MTND2P22-201ENST00000444325 1033 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 AC019235.1-201ENST00000503847 207 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 RNU7-129P-201ENST00000516128 62 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 AC119751.7-201ENST00000600494 245 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 AP003357.1-201ENST00000604497 148 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 MIR8055-201ENST00000610739 97 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 uc_338.22-201ENST00000622722 187 ntBASIC-0.37□□□□□ -2.47
HLA-DMBP28068 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 RNU6-161P-201ENST00000363051 106 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 RNA5SP98-201ENST00000363158 137 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 RNU6-483P-201ENST00000384088 108 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 HMGN2P22-201ENST00000427588 175 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 RNU7-165P-201ENST00000458864 60 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 AC107297.1-201ENST00000459991 176 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 POLR3GP1-201ENST00000594073 261 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 MIR6128-201ENST00000615528 109 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.38□□□□□ -2.47
HLA-DMBP28068 MIR8066-201ENST00000617280 78 ntBASIC-0.38□□□□□ -2.47
HLA-DMBP28068 MIR30D-201ENST00000362283 70 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 SNORD72-201ENST00000390994 80 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 SNORA26-201ENST00000391286 122 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 DEFB108C-201ENST00000400154 252 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.39□□□□□ -2.47
HLA-DMBP28068 MCFD2P1-201ENST00000417812 300 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.39□□□□□ -2.47
HLA-DMBP28068 RNU7-73P-201ENST00000458743 63 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 RNU7-159P-201ENST00000459284 62 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 RNU6-135P-201ENST00000516769 101 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 RNA5SP47-201ENST00000517230 109 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 AC145350.1-201ENST00000567426 208 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 MIR4493-201ENST00000584016 73 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 AC005176.2-201ENST00000596933 147 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 AC121247.2-201ENST00000604776 136 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 AC091304.10-201ENST00000641554 121 ntBASIC-0.39□□□□□ -2.47
HLA-DMBP28068 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-34-201ENST00000362441 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-12-201ENST00000362583 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-29-201ENST00000362834 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-9-201ENST00000362912 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-21-201ENST00000362963 81 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-14-201ENST00000363090 81 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-13-201ENST00000363358 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-41-201ENST00000363608 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-11-201ENST00000363616 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-5-201ENST00000363633 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-39-201ENST00000363694 82 ntBASIC-0.4□□□□□ -2.47
HLA-DMBP28068 SNORD115-4-201ENST00000363810 82 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms