Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 U7.7-201ENST00000459276 60 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 RNU6-437P-201ENST00000459408 95 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.71□□□□□ -2.3
XRCC1P18887 RN7SKP164-201ENST00000516138 266 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 RNU6-197P-201ENST00000516680 100 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 AC131055.1-201ENST00000584626 316 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 Pinc.1-201ENST00000616452 154 ntBASIC0.71□□□□□ -2.3
XRCC1P18887 Y_RNA.80-201ENST00000362996 102 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 RNU4-73P-201ENST00000363164 141 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 SNORA25.3-201ENST00000363205 127 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 Y_RNA.424-201ENST00000384063 103 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 Y_RNA.485-201ENST00000384395 102 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 SNORA36B-201ENST00000410438 131 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.7□□□□□ -2.3
XRCC1P18887 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.7□□□□□ -2.3
XRCC1P18887 AC109810.1-201ENST00000534066 224 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 AC025627.3-201ENST00000582078 182 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 MIR4795-201ENST00000584182 89 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 AC104695.3-201ENST00000604052 296 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 AL133255.1-201ENST00000606374 441 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 AC008133.2-201ENST00000624540 351 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 MIR4251-201ENST00000635819 61 ntBASIC0.7□□□□□ -2.3
XRCC1P18887 AC134026.1-201ENST00000623249 2239 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 Y_RNA.118-201ENST00000363300 101 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 Y_RNA.395-201ENST00000383945 109 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 SNORA72.4-201ENST00000384174 132 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 RNU7-141P-201ENST00000459304 62 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 MIR3145-201ENST00000580727 82 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 MIR548AR-201ENST00000582191 57 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 AC008507.4-201ENST00000585464 127 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 AL136317.1-201ENST00000612653 226 ntBASIC0.69□□□□□ -2.3
XRCC1P18887 Y_RNA.148-201ENST00000363557 117 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 Y_RNA.222-201ENST00000364264 102 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 SNORA1.2-201ENST00000365189 134 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 RNY3P14-201ENST00000384309 102 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 AC022028.1-201ENST00000412054 408 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 SNRPGP14-201ENST00000435400 219 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.68□□□□□ -2.3
XRCC1P18887 AL392103.1-201ENST00000447000 198 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 AC067940.1-201ENST00000458411 300 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 NDUFA4P2-201ENST00000489989 244 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 uc_338.22-201ENST00000622722 187 ntBASIC0.68□□□□□ -2.3
XRCC1P18887 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
XRCC1P18887 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 RNU4-80P-201ENST00000363200 141 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 RNU6-268P-201ENST00000364174 107 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 RNU6-144P-201ENST00000383951 107 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 MIR489-201ENST00000384923 84 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 RNU6-1110P-201ENST00000516462 101 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 RPL23AP91-201ENST00000569211 455 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 AC023827.1-201ENST00000569247 97 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 LARP7P1-201ENST00000605576 316 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 PART1_1.1-201ENST00000611761 217 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 AC006441.5-201ENST00000612680 209 ntBASIC0.67□□□□□ -2.3
XRCC1P18887 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
XRCC1P18887 Y_RNA.136-201ENST00000363444 102 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 RNU6-899P-201ENST00000363947 107 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 RNU6-801P-201ENST00000364087 105 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 Y_RNA.537-201ENST00000384626 109 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 U8.17-201ENST00000391292 132 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 RNU6-130P-201ENST00000411112 103 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 AC023449.1-201ENST00000454464 154 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 AC113410.1-201ENST00000505029 247 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 RNU6-191P-201ENST00000516295 94 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 MIR2115-201ENST00000516657 100 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 AC036111.3-201ENST00000526389 112 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 Y_RNA.804-201ENST00000615262 101 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 AC007485.1-201ENST00000616755 206 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 MIR6515-201ENST00000619843 57 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 AC090971.5-201ENST00000621102 293 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 AC090574.1-201ENST00000623186 233 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 AC068700.1-201ENST00000565862 3754 ntBASIC0.66□□□□□ -2.3
XRCC1P18887 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
XRCC1P18887 Y_RNA.183-201ENST00000363882 113 ntBASIC0.65□□□□□ -2.31
XRCC1P18887 SNORD113.3-201ENST00000364630 78 ntBASIC0.65□□□□□ -2.31
XRCC1P18887 Y_RNA.445-201ENST00000384168 102 ntBASIC0.65□□□□□ -2.31
XRCC1P18887 AL035398.1-201ENST00000430869 322 ntBASIC0.65□□□□□ -2.31
XRCC1P18887 AC010655.3-201ENST00000478818 450 ntBASIC0.65□□□□□ -2.31
XRCC1P18887 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.65□□□□□ -2.31
XRCC1P18887 SCARNA8-201ENST00000515924 131 ntBASIC0.65□□□□□ -2.31
XRCC1P18887 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.65□□□□□ -2.31
XRCC1P18887 SNORD113-8-201ENST00000363497 74 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 RNY1-201ENST00000364228 113 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 Y_RNA.286-201ENST00000364813 102 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms