Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MRPS35P2-201ENST00000508242 191 ntBASIC1.32□□□□□ -2.2
RTN3O95197 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.32□□□□□ -2.2
RTN3O95197 AC136443.5-201ENST00000603741 370 ntBASIC1.32□□□□□ -2.2
RTN3O95197 BX284668.6-201ENST00000606899 438 ntBASIC1.32□□□□□ -2.2
RTN3O95197 RNA5SP325-201ENST00000363756 130 ntBASIC1.31□□□□□ -2.2
RTN3O95197 Y_RNA.541-201ENST00000384640 113 ntBASIC1.31□□□□□ -2.2
RTN3O95197 MIR222-201ENST00000384992 110 ntBASIC1.31□□□□□ -2.2
RTN3O95197 MIR802-201ENST00000390235 94 ntBASIC1.31□□□□□ -2.2
RTN3O95197 RNU6-763P-201ENST00000390865 106 ntBASIC1.31□□□□□ -2.2
RTN3O95197 RPL21P38-201ENST00000418090 167 ntBASIC1.31□□□□□ -2.2
RTN3O95197 AC098869.1-201ENST00000481627 292 ntBASIC1.31□□□□□ -2.2
RTN3O95197 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
RTN3O95197 RNU6-1007P-201ENST00000516586 107 ntBASIC1.31□□□□□ -2.2
RTN3O95197 RNU6-1137P-201ENST00000517073 99 ntBASIC1.31□□□□□ -2.2
RTN3O95197 AP003733.2-201ENST00000529409 171 ntBASIC1.31□□□□□ -2.2
RTN3O95197 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
RTN3O95197 MIR6779-201ENST00000617283 64 ntBASIC1.31□□□□□ -2.2
RTN3O95197 AC027335.2-201ENST00000624030 375 ntBASIC1.31□□□□□ -2.2
RTN3O95197 AC134026.1-201ENST00000623249 2239 ntBASIC1.31□□□□□ -2.2
RTN3O95197 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
RTN3O95197 RNU6-806P-201ENST00000365147 105 ntBASIC1.3□□□□□ -2.2
RTN3O95197 RNU6-144P-201ENST00000383951 107 ntBASIC1.3□□□□□ -2.2
RTN3O95197 RNU6-442P-201ENST00000383968 104 ntBASIC1.3□□□□□ -2.2
RTN3O95197 MIR215-201ENST00000384858 110 ntBASIC1.3□□□□□ -2.2
RTN3O95197 RNU6-910P-201ENST00000390844 107 ntBASIC1.3□□□□□ -2.2
RTN3O95197 AL731563.1-201ENST00000442202 214 ntBASIC1.3□□□□□ -2.2
RTN3O95197 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.3□□□□□ -2.2
RTN3O95197 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
RTN3O95197 RNU6-1153P-201ENST00000516760 105 ntBASIC1.3□□□□□ -2.2
RTN3O95197 SNORA74.3-201ENST00000517108 154 ntBASIC1.3□□□□□ -2.2
RTN3O95197 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.3□□□□□ -2.2
RTN3O95197 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.3□□□□□ -2.2
RTN3O95197 RPL23AP91-201ENST00000569211 455 ntBASIC1.3□□□□□ -2.2
RTN3O95197 RNU6-1205P-201ENST00000363625 106 ntBASIC1.29□□□□□ -2.2
RTN3O95197 Y_RNA.242-201ENST00000364473 110 ntBASIC1.29□□□□□ -2.2
RTN3O95197 SNORD38C-201ENST00000384381 69 ntBASIC1.29□□□□□ -2.2
RTN3O95197 NDUFA4P2-201ENST00000489989 244 ntBASIC1.29□□□□□ -2.2
RTN3O95197 AL096861.1-201ENST00000610899 123 ntBASIC1.29□□□□□ -2.2
RTN3O95197 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RTN3O95197 MIR96-201ENST00000362288 78 ntBASIC1.28□□□□□ -2.2
RTN3O95197 Y_RNA.64-201ENST00000362845 102 ntBASIC1.28□□□□□ -2.2
RTN3O95197 SNORD114-26-201ENST00000363543 72 ntBASIC1.28□□□□□ -2.2
RTN3O95197 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
RTN3O95197 AC022709.1-201ENST00000615967 87 ntBASIC1.28□□□□□ -2.2
RTN3O95197 MIR6515-201ENST00000619843 57 ntBASIC1.28□□□□□ -2.2
RTN3O95197 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.28□□□□□ -2.2
RTN3O95197 AL442644.1-201ENST00000454390 3105 ntBASIC1.27□□□□□ -2.21
RTN3O95197 Y_RNA.26-201ENST00000362539 101 ntBASIC1.27□□□□□ -2.21
RTN3O95197 RNU6-1272P-201ENST00000362776 107 ntBASIC1.27□□□□□ -2.21
RTN3O95197 Y_RNA.422-201ENST00000384054 114 ntBASIC1.27□□□□□ -2.21
RTN3O95197 MIR520C-201ENST00000385005 87 ntBASIC1.27□□□□□ -2.21
RTN3O95197 MIR1278-201ENST00000408753 81 ntBASIC1.27□□□□□ -2.21
RTN3O95197 AC091959.1-201ENST00000495857 238 ntBASIC1.27□□□□□ -2.21
RTN3O95197 SNORD116-28-201ENST00000516123 91 ntBASIC1.27□□□□□ -2.21
RTN3O95197 RNU7-43P-201ENST00000516554 64 ntBASIC1.27□□□□□ -2.21
RTN3O95197 SNORA18.7-201ENST00000516910 131 ntBASIC1.27□□□□□ -2.21
RTN3O95197 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
RTN3O95197 AC008507.4-201ENST00000585464 127 ntBASIC1.27□□□□□ -2.21
RTN3O95197 AC013791.1-201ENST00000616619 62 ntBASIC1.27□□□□□ -2.21
RTN3O95197 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RTN3O95197 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RTN3O95197 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
RTN3O95197 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.26□□□□□ -2.21
RTN3O95197 AC245047.8-201ENST00000456455 284 ntBASIC1.26□□□□□ -2.21
RTN3O95197 SNORD11-201ENST00000459124 84 ntBASIC1.26□□□□□ -2.21
RTN3O95197 Y_RNA.637-201ENST00000459424 114 ntBASIC1.26□□□□□ -2.21
RTN3O95197 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.26□□□□□ -2.21
RTN3O95197 MIR3192-201ENST00000584920 77 ntBASIC1.26□□□□□ -2.21
RTN3O95197 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.26□□□□□ -2.21
RTN3O95197 AL391903.3-201ENST00000612158 163 ntBASIC1.26□□□□□ -2.21
RTN3O95197 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
RTN3O95197 Y_RNA.84-201ENST00000363011 104 ntBASIC1.25□□□□□ -2.21
RTN3O95197 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
RTN3O95197 MRPL35P3-201ENST00000421557 364 ntBASIC1.25□□□□□ -2.21
RTN3O95197 AC023449.1-201ENST00000454464 154 ntBASIC1.25□□□□□ -2.21
RTN3O95197 SNORD123-201ENST00000459473 70 ntBASIC1.25□□□□□ -2.21
RTN3O95197 SNORD79.1-201ENST00000516069 84 ntBASIC1.25□□□□□ -2.21
RTN3O95197 SNORA27.4-201ENST00000516650 95 ntBASIC1.25□□□□□ -2.21
RTN3O95197 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.25□□□□□ -2.21
RTN3O95197 MIR4764-201ENST00000580680 88 ntBASIC1.25□□□□□ -2.21
RTN3O95197 RNU1-124P-201ENST00000363861 145 ntBASIC1.24□□□□□ -2.21
RTN3O95197 AC113618.1-201ENST00000416747 285 ntBASIC1.24□□□□□ -2.21
RTN3O95197 BTF3P11-201ENST00000426582 477 ntBASIC1.24□□□□□ -2.21
RTN3O95197 SNRPGP14-201ENST00000435400 219 ntBASIC1.24□□□□□ -2.21
RTN3O95197 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.24□□□□□ -2.21
RTN3O95197 MIR5692C2-201ENST00000577959 77 ntBASIC1.24□□□□□ -2.21
RTN3O95197 PVT1_3.1-201ENST00000620853 95 ntBASIC1.24□□□□□ -2.21
RTN3O95197 Y_RNA.363-201ENST00000365529 113 ntBASIC1.23□□□□□ -2.21
RTN3O95197 RNU6-662P-201ENST00000384253 104 ntBASIC1.23□□□□□ -2.21
RTN3O95197 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
RTN3O95197 AC063976.4-201ENST00000421971 163 ntBASIC1.23□□□□□ -2.21
RTN3O95197 RPS23P4-201ENST00000487908 423 ntBASIC1.23□□□□□ -2.21
RTN3O95197 SERF1AP1-201ENST00000514575 187 ntBASIC1.23□□□□□ -2.21
RTN3O95197 AP003072.1-201ENST00000531740 145 ntBASIC1.23□□□□□ -2.21
RTN3O95197 PRELID3BP2-201ENST00000605362 201 ntBASIC1.23□□□□□ -2.21
RTN3O95197 UBE2WP1-201ENST00000362030 340 ntBASIC1.22□□□□□ -2.21
RTN3O95197 MIR367-201ENST00000362299 68 ntBASIC1.22□□□□□ -2.21
RTN3O95197 Y_RNA.14-201ENST00000362415 103 ntBASIC1.22□□□□□ -2.21
RTN3O95197 Y_RNA.16-201ENST00000362421 102 ntBASIC1.22□□□□□ -2.21
RTN3O95197 RNA5SP48-201ENST00000363969 126 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms