Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 Y_RNA.291-201ENST00000364886 113 ntBASIC2.74□□□□□ -1.97
PRPF40AO75400 SNORD38C-201ENST00000384381 69 ntBASIC2.74□□□□□ -1.97
PRPF40AO75400 RNA5SP57-201ENST00000459463 123 ntBASIC2.74□□□□□ -1.97
PRPF40AO75400 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.74□□□□□ -1.97
PRPF40AO75400 RNA5SP320-201ENST00000516263 124 ntBASIC2.74□□□□□ -1.97
PRPF40AO75400 RNU2-19P-201ENST00000517288 84 ntBASIC2.74□□□□□ -1.97
PRPF40AO75400 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.74□□□□□ -1.97
PRPF40AO75400 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.74□□□□□ -1.97
PRPF40AO75400 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PRPF40AO75400 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PRPF40AO75400 MIRLET7C-201ENST00000362160 84 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 Y_RNA.120-201ENST00000363304 110 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 RNU6-1292P-201ENST00000383856 107 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 MIR518F-201ENST00000384973 87 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 U8.16-201ENST00000391279 133 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 MIR891A-201ENST00000401237 79 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 SNORD23.1-201ENST00000408212 104 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.73□□□□□ -1.97
PRPF40AO75400 RNU7-12P-201ENST00000516030 62 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 RNU7-25P-201ENST00000516544 62 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 RNA5SP168-201ENST00000516642 112 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 Y_RNA.757-201ENST00000578934 114 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 AC015726.2-201ENST00000620112 122 ntBASIC2.73□□□□□ -1.97
PRPF40AO75400 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.73□□□□□ -1.97
PRPF40AO75400 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PRPF40AO75400 U8.1-201ENST00000362843 134 ntBASIC2.72□□□□□ -1.97
PRPF40AO75400 RNU6-424P-201ENST00000384367 105 ntBASIC2.72□□□□□ -1.97
PRPF40AO75400 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.72□□□□□ -1.97
PRPF40AO75400 Y_RNA.52-201ENST00000362760 96 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 RNU6-22P-201ENST00000384355 107 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 MIR548A2-201ENST00000384956 97 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 RNA5SP100-201ENST00000410903 110 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 RNA5SP59-201ENST00000410922 110 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 SNRPGP14-201ENST00000435400 219 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 AC008267.6-201ENST00000441664 139 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 AC011753.1-201ENST00000451001 220 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 AC055731.1-201ENST00000474387 401 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 AC104435.1-201ENST00000483483 166 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.71□□□□□ -1.98
PRPF40AO75400 AC026436.1-201ENST00000510537 270 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.71□□□□□ -1.98
PRPF40AO75400 SCARNA16.3-201ENST00000516595 184 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 Y_RNA.692-201ENST00000516627 105 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 AC134878.1-201ENST00000619901 243 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.71□□□□□ -1.98
PRPF40AO75400 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PRPF40AO75400 MIRLET7G-201ENST00000362280 84 ntBASIC2.7□□□□□ -1.98
PRPF40AO75400 SNORD114-30-201ENST00000364448 72 ntBASIC2.7□□□□□ -1.98
PRPF40AO75400 RNA5SP126-201ENST00000365092 109 ntBASIC2.7□□□□□ -1.98
PRPF40AO75400 RNU2-51P-201ENST00000410708 197 ntBASIC2.7□□□□□ -1.98
PRPF40AO75400 RNU6-313P-201ENST00000516317 112 ntBASIC2.7□□□□□ -1.98
PRPF40AO75400 RNU6-479P-201ENST00000516348 105 ntBASIC2.7□□□□□ -1.98
PRPF40AO75400 Y_RNA.686-201ENST00000516548 134 ntBASIC2.7□□□□□ -1.98
PRPF40AO75400 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.7□□□□□ -1.98
PRPF40AO75400 MIR4435-1-201ENST00000582552 80 ntBASIC2.7□□□□□ -1.98
PRPF40AO75400 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.7□□□□□ -1.98
PRPF40AO75400 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRPF40AO75400 SNORD115-28-201ENST00000363931 81 ntBASIC2.69□□□□□ -1.98
PRPF40AO75400 Y_RNA.547-201ENST00000384654 119 ntBASIC2.69□□□□□ -1.98
PRPF40AO75400 RNU6-1154P-201ENST00000391001 104 ntBASIC2.69□□□□□ -1.98
PRPF40AO75400 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.69□□□□□ -1.98
PRPF40AO75400 AL445646.1-201ENST00000431784 216 ntBASIC2.69□□□□□ -1.98
PRPF40AO75400 AF228730.3-201ENST00000436691 102 ntBASIC2.69□□□□□ -1.98
PRPF40AO75400 MTATP6P21-201ENST00000440681 189 ntBASIC2.69□□□□□ -1.98
PRPF40AO75400 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.69□□□□□ -1.98
PRPF40AO75400 RNA5SP82-201ENST00000516707 92 ntBASIC2.69□□□□□ -1.98
PRPF40AO75400 AC021506.2-201ENST00000612354 169 ntBASIC2.69□□□□□ -1.98
PRPF40AO75400 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
PRPF40AO75400 RNU6-833P-201ENST00000363486 107 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 Y_RNA.410-201ENST00000383992 113 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 RNU6-301P-201ENST00000384277 107 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 SNORD77.3-201ENST00000391113 65 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 AL359511.1-201ENST00000402970 211 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 RNA5SP508-201ENST00000411327 119 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.68□□□□□ -1.98
PRPF40AO75400 RNU5E-3P-201ENST00000515913 68 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 Y_RNA.690-201ENST00000516603 95 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 SNORA31.17-201ENST00000516953 127 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 AL513423.1-201ENST00000621695 132 ntBASIC2.68□□□□□ -1.98
PRPF40AO75400 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRPF40AO75400 AL365222.1-201ENST00000614661 98 ntBASIC2.67□□□□□ -1.98
PRPF40AO75400 MIR1291-201ENST00000627649 87 ntBASIC2.67□□□□□ -1.98
PRPF40AO75400 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.66□□□□□ -1.98
PRPF40AO75400 RNA5SP276-201ENST00000362580 94 ntBASIC2.66□□□□□ -1.98
PRPF40AO75400 Y_RNA.71-201ENST00000362892 104 ntBASIC2.66□□□□□ -1.98
PRPF40AO75400 RNU6-1189P-201ENST00000383958 107 ntBASIC2.66□□□□□ -1.98
PRPF40AO75400 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.66□□□□□ -1.98
PRPF40AO75400 RNU6-1234P-201ENST00000516877 103 ntBASIC2.66□□□□□ -1.98
PRPF40AO75400 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
PRPF40AO75400 MTND5P32-201ENST00000560711 1802 ntBASIC2.65□□□□□ -1.98
PRPF40AO75400 AC016717.2-201ENST00000609089 5141 ntBASIC2.65□□□□□ -1.98
PRPF40AO75400 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.65□□□□□ -1.98
PRPF40AO75400 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.65□□□□□ -1.99
PRPF40AO75400 Y_RNA.37-201ENST00000362606 108 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 Y_RNA.218-201ENST00000364218 104 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 SNORD116-14-201ENST00000383894 92 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 SNORD116-17-201ENST00000383929 92 ntBASIC2.65□□□□□ -1.99
PRPF40AO75400 RNU6-80P-201ENST00000384195 107 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms