Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1□□□□□ -2.25
TRIM49D1C9J1S8 RNU7-12P-201ENST00000516030 62 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 AC019288.1-201ENST00000557918 224 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 CYP3A52P-201ENST00000563326 91 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 AC120024.3-201ENST00000603167 156 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1□□□□□ -2.25
TRIM49D1C9J1S8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1□□□□□ -2.25
TRIM49D1C9J1S8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.277-201ENST00000364754 102 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-713P-201ENST00000384761 107 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 AL034345.1-201ENST00000407768 123 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 SUMO1P2-201ENST00000452524 304 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 RNU7-94P-201ENST00000459576 63 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 RNY3P16-201ENST00000516338 101 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 RPL23AP91-201ENST00000569211 455 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 MIR3937-201ENST00000580135 106 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 MIR4503-201ENST00000582187 83 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 AL078604.3-201ENST00000615580 211 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 U2.14-201ENST00000615943 113 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 AL513423.1-201ENST00000621695 132 ntBASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.99□□□□□ -2.25
TRIM49D1C9J1S8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.275-201ENST00000364726 110 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-326P-201ENST00000365480 107 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-211P-201ENST00000384047 107 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.422-201ENST00000384054 114 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 MIR1276-201ENST00000408707 83 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 RNA5SP247-201ENST00000411181 105 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 MTND3P2-201ENST00000438452 342 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 AC245047.8-201ENST00000456455 284 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 SNORD11-201ENST00000459124 84 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-437P-201ENST00000459408 95 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 MTCO2P24-201ENST00000515611 426 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 AL442663.2-201ENST00000554385 511 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 AL512605.2-201ENST00000592972 256 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 AC011921.3-201ENST00000605540 361 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 AC013791.1-201ENST00000616619 62 ntBASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
TRIM49D1C9J1S8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-1123P-201ENST00000362347 106 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 SNORD33-201ENST00000362761 85 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.54-201ENST00000362766 105 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.152-201ENST00000363578 100 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.193-201ENST00000363979 102 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 snoU2_19.4-201ENST00000364329 80 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.226-201ENST00000364337 114 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 U8.5-201ENST00000364528 136 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 SNORA25.8-201ENST00000364831 128 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 SNORA25.9-201ENST00000365087 128 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-163P-201ENST00000384396 106 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.539-201ENST00000384635 107 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 MT-TT-201ENST00000387460 66 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 MIR1298-201ENST00000408783 112 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-710P-201ENST00000410424 105 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 COX6CP14-201ENST00000469580 174 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 AC079140.2-201ENST00000506193 142 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 SCARNA8-201ENST00000515924 131 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.668-201ENST00000516233 93 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 Y_RNA.673-201ENST00000516306 88 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-1045P-201ENST00000516321 107 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 SNORA27.4-201ENST00000516650 95 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 RNU6-453P-201ENST00000516819 85 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 RNA5SP102-201ENST00000516865 106 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 AC090142.3-201ENST00000519012 385 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 AL512310.8-201ENST00000550183 120 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 MIR4719-201ENST00000585233 84 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 AL049861.1-201ENST00000603130 150 ntBASIC0.97□□□□□ -2.25
TRIM49D1C9J1S8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.44-201ENST00000362676 108 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.60-201ENST00000362831 98 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 SNORD27-201ENST00000363981 72 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-969P-201ENST00000383900 105 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 SNORA70.7-201ENST00000384159 133 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.518-201ENST00000384552 113 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 MIR570-201ENST00000384917 97 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 SNORD28B-201ENST00000390993 75 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 RNA5SP482-201ENST00000391269 118 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 MIR1302-6-201ENST00000408466 90 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 SNRPGP14-201ENST00000435400 219 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 SNORD127-201ENST00000458892 86 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 AL133373.1-201ENST00000497098 94 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 SNORD45.4-201ENST00000516629 73 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 MIR5692C2-201ENST00000577959 77 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 MIR3192-201ENST00000584920 77 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 MIR4762-201ENST00000585261 75 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 FAM106DP-201ENST00000586416 501 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 AL021707.8-201ENST00000609428 183 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 AL096861.1-201ENST00000610899 123 ntBASIC0.96□□□□□ -2.26
TRIM49D1C9J1S8 UBE2WP1-201ENST00000362030 340 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 RNA5SP327-201ENST00000362494 101 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.24-201ENST00000362508 103 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-199P-201ENST00000362954 107 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-1205P-201ENST00000363625 106 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms