Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 AL080274.1-201ENST00000605565 220 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 AC010205.1-201ENST00000616668 449 ntBASIC0.45□□□□□ -2.34
TRAV39A0A0B4J263 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-396P-201ENST00000365369 105 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 RNY1P8-201ENST00000383970 114 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.462-201ENST00000384268 102 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 SNORD72-201ENST00000390994 80 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 MIR1827-201ENST00000408549 66 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 MIR548J-201ENST00000408833 112 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 SNORA36B-201ENST00000410438 131 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 RNU2-14P-201ENST00000411053 191 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 SNRPGP14-201ENST00000435400 219 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.632-201ENST00000459189 102 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-437P-201ENST00000459408 95 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 snoU13.18-201ENST00000459483 104 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 AC010655.3-201ENST00000478818 450 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 MIR548AO-201ENST00000579992 96 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 AL132765.2-201ENST00000610812 351 ntBASIC0.44□□□□□ -2.34
TRAV39A0A0B4J263 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 RNA5SP347-201ENST00000362445 119 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.813-201ENST00000364639 102 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.370-201ENST00000365589 108 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.505-201ENST00000384489 102 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-613P-201ENST00000410412 108 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 AL160004.2-201ENST00000432935 350 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 RNU7-141P-201ENST00000459304 62 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 AC008507.4-201ENST00000585464 127 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 AL121655.1-201ENST00000605811 308 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 MIR4791-201ENST00000607666 84 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 MTND1P7-201ENST00000632801 297 ntBASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV39A0A0B4J263 RNU4-80P-201ENST00000363200 141 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.187-201ENST00000363918 113 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.383-201ENST00000383855 97 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.439-201ENST00000384119 94 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.551-201ENST00000384661 102 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-205P-201ENST00000390858 107 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 AC015818.7-201ENST00000428754 109 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 AC087499.7-201ENST00000441958 109 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 snoU13.21-201ENST00000459368 105 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-830P-201ENST00000516353 107 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 RNU4-77P-201ENST00000516692 156 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 MIR2681-201ENST00000581814 105 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 UBE2V2P2-201ENST00000587677 504 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 AC068700.1-201ENST00000565862 3754 ntBASIC0.42□□□□□ -2.34
TRAV39A0A0B4J263 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.168-201ENST00000363740 102 ntBASIC0.41□□□□□ -2.34
TRAV39A0A0B4J263 Y_RNA.269-201ENST00000364685 89 ntBASIC0.41□□□□□ -2.34
TRAV39A0A0B4J263 RNY3-201ENST00000365484 102 ntBASIC0.41□□□□□ -2.34
TRAV39A0A0B4J263 RNY1P14-201ENST00000384426 108 ntBASIC0.41□□□□□ -2.34
TRAV39A0A0B4J263 POLR2KP2-201ENST00000438155 177 ntBASIC0.41□□□□□ -2.34
TRAV39A0A0B4J263 AC005357.1-201ENST00000588399 301 ntBASIC0.41□□□□□ -2.34
TRAV39A0A0B4J263 AC104695.3-201ENST00000604052 296 ntBASIC0.41□□□□□ -2.34
TRAV39A0A0B4J263 SNORD58B-201ENST00000607313 66 ntBASIC0.41□□□□□ -2.34
TRAV39A0A0B4J263 RNU6-1115P-201ENST00000362490 106 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.286-201ENST00000364813 102 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.471-201ENST00000384312 102 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 AL603910.2-201ENST00000407268 136 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 RBMX2P4-201ENST00000441256 376 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 U8.20-201ENST00000459445 131 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 AL606534.2-204ENST00000635008 178 ntBASIC0.4□□□□□ -2.35
TRAV39A0A0B4J263 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 SNORA72.1-201ENST00000363485 129 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-801P-201ENST00000364087 105 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 SNORA72.4-201ENST00000384174 132 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.537-201ENST00000384626 109 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 MIR520F-201ENST00000384824 87 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 SNORD83.1-201ENST00000411362 77 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 SNORD19B-201ENST00000459623 84 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 SCARNA8-201ENST00000515924 131 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 AL138825.1-201ENST00000618587 192 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.5-201ENST00000362334 102 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 SNORD45.3-201ENST00000363836 72 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 SNORA1.2-201ENST00000365189 134 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.356-201ENST00000365475 113 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 Y_RNA.376-201ENST00000365638 108 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 SNORD63-201ENST00000384262 68 ntBASIC0.38□□□□□ -2.35
TRAV39A0A0B4J263 MIR520H-201ENST00000385126 88 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms