Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC087499.7-201ENST00000441958 109 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 AC098826.2-201ENST00000452011 651 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 MIR4676-201ENST00000583078 72 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 AC087685.1-201ENST00000587507 141 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 MIR4791-201ENST00000607666 84 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 AC022079.1-201ENST00000621546 602 ntBASIC0.04□□□□□ -2.4
USH1CQ9Y6N9 SNORA42.1-201ENST00000363515 137 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.146-201ENST00000363549 102 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 SNORD14E-201ENST00000364009 85 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 RNU6-268P-201ENST00000364174 107 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.280-201ENST00000364765 112 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.295-201ENST00000364918 102 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.339-201ENST00000365325 102 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.404-201ENST00000383978 102 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 SNORD38C-201ENST00000384381 69 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 SNORA51.10-201ENST00000384418 136 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 MIR181A1-201ENST00000385026 110 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 RNU6-205P-201ENST00000390858 107 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 RNU6-192P-201ENST00000391253 100 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.682-201ENST00000516457 100 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 RNU4-77P-201ENST00000516692 156 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 RNA5SP94-201ENST00000516917 108 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.714-201ENST00000517065 90 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 AC069113.3-201ENST00000521019 150 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 MIR4771-2-201ENST00000577758 74 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 MIR4771-1-201ENST00000582617 74 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 MIR4264-201ENST00000583520 66 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 AC006380.1-201ENST00000603598 186 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 uc_338.6-201ENST00000613544 171 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 AC087588.2-201ENST00000617667 426 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 MIR4315-1-201ENST00000636800 73 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 MIR4315-2-201ENST00000640925 73 ntBASIC0.03□□□□□ -2.4
USH1CQ9Y6N9 Y_RNA.2-201ENST00000362330 96 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.89-201ENST00000363031 102 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 RNU6-815P-201ENST00000384080 113 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.446-201ENST00000384178 104 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 RNU6-601P-201ENST00000384540 107 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.517-201ENST00000384551 106 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 AC009161.1-201ENST00000417306 376 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 AC090844.1-201ENST00000422019 156 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 MTND4P28-201ENST00000426217 387 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 RPL17P19-201ENST00000489069 552 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 AC091959.1-201ENST00000495857 238 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 RNU4-49P-201ENST00000516080 140 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 EIF1P4-201ENST00000572664 335 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 MIR1244-1-201ENST00000612829 85 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 MIR1244-3-201ENST00000635744 85 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 MIR1244-2-201ENST00000636449 85 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 MIR1244-4-202ENST00000636813 85 ntBASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
USH1CQ9Y6N9 RNU6-324P-201ENST00000363957 106 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.203-201ENST00000364106 102 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.310-201ENST00000365063 113 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 RNU6-442P-201ENST00000383968 104 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 MTCO2P33-201ENST00000402100 465 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 AC073261.1-201ENST00000429409 121 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 RPL7P42-201ENST00000481005 679 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 RNU6-314P-201ENST00000516574 104 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.708-201ENST00000516950 96 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 RNU7-181P-201ENST00000517234 74 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 AC090897.1-201ENST00000580909 226 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 AC008507.4-201ENST00000585464 127 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 AP000753.3-201ENST00000604083 169 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 AP003357.1-201ENST00000604497 148 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 AC006441.5-201ENST00000612680 209 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 uc_338.4-201ENST00000616635 176 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 AC092794.2-201ENST00000620933 563 ntBASIC0.01□□□□□ -2.41
USH1CQ9Y6N9 SNORA24-201ENST00000384096 131 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 SNORA8.2-201ENST00000384372 139 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.554-201ENST00000384672 102 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 AL603910.2-201ENST00000407268 136 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.592-201ENST00000410274 109 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0□□□□□ -2.41
USH1CQ9Y6N9 MTND3P10-201ENST00000450967 341 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 RPL30P15-201ENST00000457129 321 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 RPL23AP91-201ENST00000569211 455 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 AC008608.1-201ENST00000603910 127 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 AC022441.3-201ENST00000605737 136 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 SNORA25.18-201ENST00000607153 114 ntBASIC0□□□□□ -2.41
USH1CQ9Y6N9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.01□□□□□ -2.41
USH1CQ9Y6N9 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
USH1CQ9Y6N9 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.01□□□□□ -2.41
USH1CQ9Y6N9 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.01□□□□□ -2.41
USH1CQ9Y6N9 RNU6-20P-201ENST00000384106 107 ntBASIC-0.01□□□□□ -2.41
USH1CQ9Y6N9 RNU6-767P-201ENST00000384132 107 ntBASIC-0.01□□□□□ -2.41
USH1CQ9Y6N9 RNY3P4-201ENST00000384428 101 ntBASIC-0.01□□□□□ -2.41
USH1CQ9Y6N9 AF228730.4-201ENST00000421457 183 ntBASIC-0.01□□□□□ -2.41
USH1CQ9Y6N9 RPS3AP52-201ENST00000435639 297 ntBASIC-0.01□□□□□ -2.41
USH1CQ9Y6N9 FCF1P4-201ENST00000448326 183 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 860.7 ms