Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC008163.1-202ENST00000636004 2889 ntBASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.136-201ENST00000363444 102 ntBASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 Y_RNA.183-201ENST00000363882 113 ntBASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 SNORA72.4-201ENST00000384174 132 ntBASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 RNU6-1067P-201ENST00000384752 107 ntBASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 RNU6-321P-201ENST00000410912 106 ntBASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 MTND4LP11-201ENST00000422184 280 ntBASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 SNORD123-201ENST00000459473 70 ntBASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 RPS26P48-201ENST00000491713 339 ntBASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CHCHD3Q9NX63 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 MIR103A2-201ENST00000362154 78 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 U8.7-201ENST00000364940 136 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 RNU1-36P-201ENST00000365130 165 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 SNORA75.2-201ENST00000391138 150 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 SNORA75.3-201ENST00000391231 150 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 RNU4-30P-201ENST00000410245 143 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 AC117454.1-201ENST00000491120 168 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 PDCD5P2-201ENST00000507570 312 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 SNORA18.7-201ENST00000516910 131 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 MIR376A1-201ENST00000616574 68 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 AC007485.1-201ENST00000616755 206 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 SEPT14P17-201ENST00000617978 177 ntBASIC0.96□□□□□ -2.26
CHCHD3Q9NX63 RNU4-90P-201ENST00000362773 141 ntBASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.796-201ENST00000364268 102 ntBASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.799-201ENST00000364992 102 ntBASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 RNU6-144P-201ENST00000383951 107 ntBASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 MIR146A-201ENST00000385201 99 ntBASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 AC124312.5-201ENST00000604451 268 ntBASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 PART1_1.1-201ENST00000611761 217 ntBASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.95□□□□□ -2.26
CHCHD3Q9NX63 RNU6-1209P-201ENST00000363655 107 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 RNU6-899P-201ENST00000363947 107 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.380-201ENST00000365663 111 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.460-201ENST00000384255 102 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.485-201ENST00000384395 102 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 SNORA36B-201ENST00000410438 131 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 RNU6-130P-201ENST00000411112 103 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.715-201ENST00000517082 110 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 MIR4300-201ENST00000581016 96 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 AC008507.4-201ENST00000585464 127 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 AC211469.2-201ENST00000605461 205 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 AL020996.3-201ENST00000606617 222 ntBASIC0.94□□□□□ -2.26
CHCHD3Q9NX63 RNU4-80P-201ENST00000363200 141 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 MIR942-201ENST00000401111 86 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 RNU6-101P-201ENST00000410323 104 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 RNU2-64P-201ENST00000411315 191 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 AC023449.1-201ENST00000454464 154 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 RNU7-141P-201ENST00000459304 62 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 SNORD124-201ENST00000459577 104 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.676-201ENST00000516393 96 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 RNU6-988P-201ENST00000519081 107 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 MIR3145-201ENST00000580727 82 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 MIR4653-201ENST00000585107 83 ntBASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
CHCHD3Q9NX63 SNORD113-8-201ENST00000363497 74 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 SNORA1.2-201ENST00000365189 134 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.509-201ENST00000384506 99 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 MIR1252-201ENST00000408861 65 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 snoU13.25-201ENST00000458945 104 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 AC005840.1-201ENST00000498412 377 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 AC005357.1-201ENST00000588399 301 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 C8orf59P2-201ENST00000603441 271 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 Pinc.1-201ENST00000616452 154 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 AL160413.1-201ENST00000622780 310 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 AC091895.1-201ENST00000624494 256 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 AC008133.2-201ENST00000624540 351 ntBASIC0.92□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.28-201ENST00000362554 111 ntBASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 Y_RNA.276-201ENST00000364732 109 ntBASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 SNORD115-46-201ENST00000390982 71 ntBASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 SNRPGP14-201ENST00000435400 219 ntBASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 RNU7-41P-201ENST00000515917 61 ntBASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 RNU6-191P-201ENST00000516295 94 ntBASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 AC037487.3-201ENST00000606668 112 ntBASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 AC006441.5-201ENST00000612680 209 ntBASIC0.91□□□□□ -2.26
CHCHD3Q9NX63 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
CHCHD3Q9NX63 MIR369-201ENST00000362155 70 ntBASIC0.9□□□□□ -2.27
CHCHD3Q9NX63 RNU6-801P-201ENST00000364087 105 ntBASIC0.9□□□□□ -2.27
CHCHD3Q9NX63 Y_RNA.631-201ENST00000459607 101 ntBASIC0.9□□□□□ -2.27
CHCHD3Q9NX63 NDUFA4P2-201ENST00000489989 244 ntBASIC0.9□□□□□ -2.27
CHCHD3Q9NX63 SCARNA8-201ENST00000515924 131 ntBASIC0.9□□□□□ -2.27
CHCHD3Q9NX63 RN7SKP164-201ENST00000516138 266 ntBASIC0.9□□□□□ -2.27
CHCHD3Q9NX63 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.9□□□□□ -2.27
CHCHD3Q9NX63 MIR4781-201ENST00000585250 76 ntBASIC0.9□□□□□ -2.27
CHCHD3Q9NX63 Y_RNA.128-201ENST00000363391 112 ntBASIC0.89□□□□□ -2.27
CHCHD3Q9NX63 Y_RNA.581-201ENST00000391017 97 ntBASIC0.89□□□□□ -2.27
CHCHD3Q9NX63 RNU6-823P-201ENST00000391042 103 ntBASIC0.89□□□□□ -2.27
CHCHD3Q9NX63 MIR1185-1-201ENST00000408598 86 ntBASIC0.89□□□□□ -2.27
CHCHD3Q9NX63 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.89□□□□□ -2.27
CHCHD3Q9NX63 PMCHL1-202ENST00000423102 261 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms